2EBI


Conserved Protein Domain Family
Myb_DNA-bind_4

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pfam13837: Myb_DNA-bind_4 (this model, PSSM-Id:404682 is obsolete and has been replaced by 463994)
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Myb/SANT-like DNA-binding domain
This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.
Statistics
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PSSM-Id: 404682
Aligned: 122 rows
Threshold Bit Score: 37.6377
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2EBI_A         4 AETWVQDETRSLI-MFR---RGmd----gLFNT------------SKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLL 63  thale cress
XP_002006084  83 NPNFDTDETKLLI-QLW---GDpkl-qrtLITT-------------HKKHAVICQLAAKMQEYGYHRSPEEITTRIKNLK 144 Drosophila moja...
Q16HJ8       333 KPEFARLKVRKNIfPPW---NRiq---tvLLIKihcd-----lrpKFKGYNLFECVSNKLIELHINRTPRDCRTRWNNLF 401 yellow fever mo...
EEF33741     113 RMKWTDSMVRLLI-MAVfyiGDeag-segNNDPstgkk--kagggLSQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLN 188 castor bean
Q6NZR2       101 GMSWTPAETNALI-AVW---GNerl-veaRYQQlegag--tvfgsKAPGPAMYERVSRALAELGYERTPSQCRERIKTLR 173 house mouse
EES05214      92 RVKWTSGMVKLLV-TAV---SYidedvdaDYGTssgrr--khallKRKGK--WRLVSSAMAERGFAVSPQQCEDKFNDLN 163 sorghum
Q6ESZ1        94 RVKWISGMVKLLV-SAV---AYidedvdmDYGTgsaar---rkhaMLKRKGKWRLVSAAMTERGFPVSPQQCEDKFNDLN 166 Japanese rice
Q9LMN5       116 RVKWTDKMVKLLI-TAV---SYigd--dsSI-Dsssrr--kfavlQKKGK--WKSVSKVMAERGYHVSPQQCEDKFNDLN 184 thale cress
XP_002266272 116 RVKWTDKMVRLLI-TAV---SYig---edAASEcgvggrrkyailQKKGK--WKSVSKVMAERGHYVSPQQCEDKFNDLN 186 wine grape
EDW03110      58 TNRVMQADEDFNI-RFV---NLvrt-hrcLYDKkvpe----yrnrDNQE-KAWSLISEDTRESVI-----HCKERWRNLR 122 Drosophila grim...
2EBI_A        64 KEFKKAKH----HDrGNg-Sa--KMSY-------------------------------YKE 86  thale cress
XP_002006084 145 CFYNRLKKdkeyGMsGDt-Ep--SWKH-------------------------------FAE 171 Drosophila mojavensis
Q16HJ8       402 RSYKECRS----RLrVNd-KapvKFEY-------------------------------FDE 426 yellow fever mosquito
EEF33741     189 KRYKRVND----IL-GKg-T---ACKVvenqslletmdlspk-mkeevkkllnskhlfFRE 239 castor bean
Q6NZR2       174 RCYSRVKE----HGvGKr-K---SSYT-------------------------------FEQ 195 house mouse
EES05214     164 KRYKRLTE----Il-GRg-R---ACQIve----------------------------kHEL 187 sorghum
Q6ESZ1       167 KRYKRMTE----Il-GRg-T---ACQV-------------------------------VEh 187 Japanese rice
Q9LMN5       185 KRYKKLND----Ml-GRg-T---SCQVvenpalldsigylndkekddvrkimsskhlfYEE 236 thale cress
XP_002266272 187 KRYKRLND----Vl-GRg-T---SCQVvenpalldmmdhltektkedvrkilsskhlfYEE 238 wine grape
EDW03110     123 ACLSRYIK----QQsGSepQh--KPYYl------------------------------TEH 147 Drosophila grimshawi
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