Conserved Protein Domain Family
PDCD9

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pfam07147: PDCD9 (this model, PSSM-Id:399848 is obsolete and has been replaced by 462101)
Mitochondrial 28S ribosomal protein S30 (PDCD9)
This family consists of several eukaryotic mitochondrial 28S ribosomal protein S30 (or programmed cell death protein 9 PDCD9) sequences. The exact function of this family is unknown although it is known to be a component of the mitochondrial ribosome and a component in cellular apoptotic signaling pathways.
Statistics
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PSSM-Id: 399848
Aligned: 23 rows
Threshold Bit Score: 499.604
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O61818               17 KATTAGADLPqSSQEIEvttpkSENVPAKSANAST-------------VYRPpyyrkphqhhepkhmlqeeFVNAGDASG 83  Caenorha...
XP_002639732         17 KASTAAd----IPKEEVvqtskSEEVAPKAANAST-------------VYRPpyyrkphkyhesshilqeeFANAGDASG 79  Caenorha...
EEZ98800              2 SALRLNKNLLkRCKKFKcf--sTAVLQEDEYTATP-------------QYPP-------------------I---LDMSP 44  red flou...
Q9VXP3                8 RHLRT-------TYKRCls--gQSQLQLNSTDAEP-------------AYPE-------------------I---QDLSF 43  fruit fly
WGS:AANI:GJ18480-PA   8 EQLRARLNAAcRRYLAIkaepkAVTVAESEYSAEP-------------EYPA-------------------I---RDMSF 52  Drosophi...
Q29CP7                8 NQLRA-------SYIRFva--qATSATSNEYSCQP-------------EYPP-------------------I---RDLTH 43  Drosophi...
Q16NZ6                4 QSFRRNLQLMlRSTNRLslstrALANPSEQYTAQP-------------QYPA-------------------I---EDPSF 48  yellow f...
XP_322027             4 RNFRPNLWLLgRHGHRAla-srPLPSKEHEYTNSP-------------EYPP-------------------I---QDLSF 47  Anophele...
XP_023116621          1 MAAARCCRLA-LRRSRL-----SLHTAAEAAVAAPevtgavvaaapvaRYPP-------------------IVASLTAKS 55  domestic...
XP_006095448          1 MAAARWWRLV-PRGPGR-----SVHSAAQAAVGTPdipgaegaaapvaRYPP-------------------IVASMTADS 55  little b...
O61818               84 AGVRVFDYYKTAEMVHSMPTIKEKIDFVSPYERPwtraektwrrdwhptLMatrkawGIPPTPAHFDTLDYYKYLTKTRV 163 Caenorha...
XP_002639732         80 AGVRLFDYYKTAEMVNAMPTIKEKIDLVSPYERPwtraertwrrdwhptLMatrkawGIPPTPAHFDTLDYYKYITKTRV 159 Caenorha...
EEZ98800             45 EKVRERRKEEEYEGIKAVKTVEEKQ---IKLNMP---------------KYygfksyMLYEDYIPYNSLPLIQHVTRTHL 106 red flou...
Q9VXP3               44 KARKQKDAANWHEEIRQVPTVEEKM---IKINMP---------------RYygfkvvDFNDSKIPYNALPLTQHYTRTVL 105 fruit fly
WGS:AANI:GJ18480-PA  53 KGRKLQSAAEWHEEIRQVPTVEEKM---IKINMP---------------RYygykvvDLNDTKVPFNALPLTQHYTRTVL 114 Drosophi...
Q29CP7               44 KALKRREANDWHEEIRKVPTVEEKI---IKVNMP---------------RYygykvvDFNDNKIPYNALPVTQHYTRTVL 105 Drosophi...
Q16NZ6               49 RSKKKREAAEWHERIQQLSSVEEKL---FEINMP---------------KYygykahIITDQKFPYNVLPLAQYATRTHL 110 yellow f...
XP_322027            48 PAKKKRERESWHQKIAKLSSVEEKL---FEINMP---------------KYygykmnMLTDEKFPYNIKPFMQYATRTCF 109 Anophele...
XP_023116621         56 KAARQRRVERWQATVHAAESVDEKLRILTKMQFM---------------KY------VVYPQTFALNADRWYQGFTKTVF 114 domestic...
XP_006095448         56 KAARQRRVERWQAAVHAARTADEKIRILTKMQFK---------------KY------VVYPQTFALNADRWYQGFTKTVF 114 little b...
O61818              164 en-----------------------esLDDFYHGLRPPTAD-LQTS-----FQNtLKSMEFGDGINFSDEDTQKLFGSLI 214 Caenorha...
XP_002639732        160 en-----------------------ksLDDFYHGLRPPTAE-LQQS-----FQNtLKSMEFGDGITFSEEDTQKLFGCLI 210 Caenorha...
EEZ98800            107 iknenlpnf-------------yndldvtsaLNDVKSDIEEaILIElarhrQTLdLQG----DKVEADNRLGFALSKQIN 169 red flou...
Q9VXP3              106 edlpsetdkkaq---akdseqeqeqpsVDGLFKAARGDVIDaLEFAhdyykHLEkQHNSAESNPVERERILTQIIVEQLN 182 fruit fly
WGS:AANI:GJ18480-PA 115 eelppkqa-----------epgeekvdLDATVKVARNDIIEaLEFAhdcykHQLtLLD-TPPDAVTREQQLTQIIVEQIN 182 Drosophi...
Q29CP7              106 kelpllsad----------etetsefsSVAFLKTARDDIIDaLELAhdfynHQAtLPDVAPSDSVNRERQLTQIIVEQLN 175 Drosophi...
Q16NZ6              111 qenlpety-------------gklgeeakKLLEEIRGNLEDvIGFEltgysRSY--GSNEEISPEEKEEIVTSSLLTALN 175 yellow f...
XP_322027           110 qtglpqyy-------------dplkeeaaKILESIQTELEDtIALElsnysH---VKRDETVSPVEKEETVVRSLLVQLN 173 Anophele...
XP_023116621        115 lsglpppppg--------epaepaepsPTLDLEALRAAACDcLLQE-----HFY-LRRKRRAPLYQDREAIASPFLDQLV 180 domestic...
XP_006095448        115 lsglpppaepgsppsesgsppaepappPVPDLATLRAAACDcLLQE-----HFY-LRRQGRAPLYQQVEAVASPFLDQLV 188 little b...
O61818              215 DDAMGGIAHNVSRLADHRVAYDVESEAFWVRSGFMFLydee-eigtRDVKRRLNNFPKFIGDDrrklgelafvhrdKLAA 293 Caenorha...
XP_002639732        211 DDAMGAIAHNVSRLADHRVAYDVESEAFWVRSGFMFLydepvigsnKDHKRRLNNFPKFIGDDrrklgelafvhrdKLAA 290 Caenorha...
EEZ98800            170 RIITTRMSRHLPHLKGAQVDLNSRIKSFWLAGGMSPP---------ENIKRYR-RGCSWQKDKeneptnrvmnyigSANV 239 red flou...
Q9VXP3              183 RALLQSLSEEYKHLDELDVDYNPRHEAFWAVGGVDPP---------KNVQKSK-KGREWQKDManesvdrmvqytgAPYL 252 fruit fly
WGS:AANI:GJ18480-PA 183 RSALQVLSAEYPHLNEVEIDYNPRHEAFWAVGGVDPP---------KNVVKSK-KGRDWQKADaydsvdrlvqytgEPYL 252 Drosophi...
Q29CP7              176 RALLQILSADYPHLNDVEVDYNPRHEAFWAVGGVDPP---------KNVVKSK-KGRDWQKDDasesvdrlvqytgAPYL 245 Drosophi...
Q16NZ6              176 RALINSLSKKYTHLNEVETDFDPRHESFWFLGGIPPP---------SLVKKIK-EGVEWQKEYandpydrkiqyigKPYI 245 yellow f...
XP_322027           174 RTIANALAPKFNHLNEIETDVDPRHEAFWFLGGIYPP---------NLVRKIK-EGVEWQKQYandpydrniqyvgKPYM 243 Anophele...
XP_023116621        181 AALVGLLSAHNPALATAALDCKRPVHFYWLRGEEIIP---------SGHRKGRVDALRYQIND-------------KPHN 238 domestic...
XP_006095448        189 AALMGLLSEHNPALATAAlDCKRPVHFYWCRGEEIIV---------HGHRKGRVDAVRYQIND-------------TPHN 246 little b...
O61818              294 QVRSKEPSA-PLHSFDSedaklpIFDTNYnfeetlfspKVYNLWPDQEPLWQCPGYHADS-------GESHTYGILGVKS 365 Caenorha...
XP_002639732        291 QIRSREPPA-LLHSLDSddaklpVFEKDFnieetlyspKVFNLWPDQQPLWQCPGYHADS-------GETHSYGLLSVKS 362 Caenorha...
EEZ98800            240 SLRTDLPLKhIISSSDAesp-----dlSV---------PFFEFDPRTVGTVANQHRHIANvpg-fwpGDSREFGFLSYH- 303 red flou...
Q9VXP3              253 ALRHRKQLT-PWK-TEAese-nlELSKQL---------PRFKHDPRTLG-YSTKHQHATNvpgywpkGNENNFGLLSFQ- 318 fruit fly
WGS:AANI:GJ18480-PA 253 ALRHRHQLP-TWK-TPEese-nlTLANQL---------PRYKHDARTLG-YSTKYQHAINvpgywpsVNAPNFGMLSFQ- 318 Drosophi...
Q29CP7              246 SLRHRQQLC-PWM-TDGeskmmdPHARHL---------PRFNHDARTLG-YRTSYQHAVNvpgywpsANGANFGLLSFQ- 312 Drosophi...
Q16NZ6              246 ALRHKHPLD-VFAENNVdnldakRDGVEI---------PEFRFDPITLG-YKTEQRHATTipg-fwpGDQHEFGLVSFQ- 312 yellow f...
XP_322027           244 ALRHKLLLE-PLLPKDLesfdvkQDGAEI---------PDYRYDPLALG-YIADFRHATTvpg-fwpGEQHEFGLLSFQ- 310 Anophele...
XP_023116621        239 QIRMSKQLP-EFVPLDY------SVPVEI---------PVMNCKPDKLPLFKRQYENTIFigs--ktADPYCYGHTQFHL 300 domestic...
XP_006095448        247 QIRMSKQLP-EFVPLDY------SVPIEI---------PVMNCKPDKLPLFKRQYENAIFigs--ktADPYCYGHTQFHL 308 little b...
O61818              366 LRPLRKRiahwmgweNENELESseeAKQMLDDGARSQAIISMFTTLCAQAHTHGFTQYTDITRSFTSQLVLSDGINFWFA 445 Caenorha...
XP_002639732        363 LRPLRERvahwmgweSQAELEEspeAKQMIDDGARSQAVISMFTTLCAQAHTHGFTQYTDVTRPFTSQMILSDGLNFYFA 442 Caenorha...
EEZ98800            304 -----KR--------GHLISRHy-gDANELKEAVDRQGILASFGWLNAQANFQGFTTFNDVTYPFVTQTVVTNGQVWSFY 369 red flou...
Q9VXP3              319 -----SR--------AHLQIRPksfGEQDQLEALHSLAIKSSYAWLLAQANYNGFNTYNELTYPMNTQTVITNGREWSFY 385 fruit fly
WGS:AANI:GJ18480-PA 319 -----SR--------AHLQLRPqacGERDQLEALHALGIQSSYAWLLAQANYNGFNTYNELTYPLNTQTVITNGREWSFY 385 Drosophi...
Q29CP7              313 -----SR--------ASLQMRHkayGDRDLQEALHALAIKSSYSWLLAQANYNGFNTYNDLTYPMNTQTVITNGREWSFY 379 Drosophi...
Q16NZ6              313 -----RR--------SHAHLRPsycAIDDLQEALHAQGIFSSYAWTLGQACYQGFSTFNDLTYPLATQTVITDGKMWSFY 379 yellow f...
XP_322027           311 -----RR--------SHALNRHkycAVDDLSEAIDAQGILSSFAWLLGQACYQGFSVFNDVTYPLTTQTVITDGKYWSFY 377 Anophele...
XP_023116621        301 LPDKLKR--------ERLLKQN---CADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQGVITDGKYFSFF 369 domestic...
XP_006095448        309 LPEKLNR--------ERLLRQN---CADQIEVVHRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGRYFSFF 377 little b...
O61818              446 IGQLNTIAINVECDGfVNPRTNYIRIDGPYRLFDYCdKNGQYLsvqeeidaenkvqrkiapGLNEKVLERVTQMLM 521 Caenorhabdit...
XP_002639732        443 VGQLNTLAINVDCEGfVNPRTNFIQIDGPHRLFEIVdEDGNYTssqeyvdaknnvnrrvdsGLNEKvlervtqmlm 518 Caenorhabdit...
EEZ98800            370 VYQLNTIVNHSKFFT-ENAKRNVCWGTPEVKLFEGV-ENDKLV------------------GFNDEVLKMLLKFYA 425 red flour be...
Q9VXP3              386 EYQLNTLLLHGTNVA-ENPRVNFCRGTKPLPLYAEIsASGKCV------------------DFNDNALRHLLNFYA 442 fruit fly
WGS:AANI:GJ18480-PA 386 EYQLNTLLVHGPHVD-SNARVNFCRGTAPQPLYAEIsPEGKCV------------------DFNDGTLRQLLTLYI 442 Drosophila v...
Q29CP7              380 EYQLNTLLLHSNQVN-ENPRVNFCRGTPPLPLYAEIsEKGKCV------------------DFNDATLKQLLRVYM 436 Drosophila p...
Q16NZ6              380 AYQLNTTLLHSDQVD-VNPRYNQCWGTKELQLYEHVdENGKVH------------------GMNDEVLLHLISFYM 436 yellow fever...
XP_322027           378 AYQLNTTLLHSDQVD-ANSRYNLCWGTDAMQLYESIdENGKIN------------------GLNKEVLQQIIMFYI 434 Anopheles ga...
XP_023116621        370 CYQLNTLALTTQADQ-NNPRKNICWGTQSKPLYETI-EDNNVK------------------GFNDDVLLQIVHFLL 425 domestic cat
XP_006095448        378 CYQLNTLALTAQADQ-NNSRKNICWGTQSKPLYETI-EDNDVK------------------GFNDDVLLQIVHFLL 433 little brown...
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