Conserved Protein Domain Family
Chitin_bind_4

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pfam00379: Chitin_bind_4 (this model, PSSM-Id:395303 is obsolete and has been replaced by 459790)
Insect cuticle protein
Many insect cuticular proteins include a 35-36 amino acid motif known as the R&R consensus. The extensive conservation of this region led to the suggestion that it functions to bind chitin. Provocatively, it has no sequence similarity to the well-known cysteine-containing chitin-binding domain found in chitinases and some peritrophic membrane proteins. Chitin binding has been shown experimentally for this region. Thus arthropods have two distinct classes of chitin binding proteins, those with the chitin-binding domain found in lectins, chitinases and peritrophic membranes (cysCBD) and those with the cuticular protein chitin-binding domain (non-cysCBD).
Statistics
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PSSM-Id: 395303
Aligned: 102 rows
Threshold Bit Score: 37.2376
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17BL9  41 FQYSYESGNGiKV-----EDQGElkvvevpkedgtGTEQAQVSVQkGSYSYNAPDGTPITLQWTA-DENGF 105 yellow fever mosquito
Q0IGD5  43 FGAAYDQEDG---------TNFK------------EETDADGNRR-GSYSYLDPSGQRRTISYVA-GKNGF 90  yellow fever mosquito
Q7QCN4   5 YAFTYSAGRS-PGhvdrtHSEVS---------------DGSGVVR-GSFSYVDPRNQVRTVEYTA-DSHGF 57  Anopheles gambiae str. PEST
Q7K5J8  32 YVFSYQAGRA-PGhvdrqHTEVS---------------DGSGVIR-GAFSYVDPKNQVRTVQYVA-DEHGF 84  fruit fly
Q17CD7  98 AMFGYTDHNQ-AR------LEAR---------------NANGEVR-GSYQYVDPFGQEVVVQYWS-DSLGF 144 yellow fever mosquito
Q16UY4  36 YQYGYNDGHA-VK------EESR---------------YADGTVR-GSYRYVDANRVTQNVIYRA-DKNGY 82  yellow fever mosquito
Q16EK6  45 YSYGYADPNS-QK------HETK---------------DAHGVTH-GGYSYVDGDGHVQTVKYTAdPIHGF 92  yellow fever mosquito
Q29EJ3  50 YSYGYSDDTA-AR------AEYS---------------SRDGSSR-GFYSYVDADGKLQTVRYEAsRGQGF 97  Drosophila pseudoobscura
Q16Q10  29 YSYGYNGGLS-AK------TETK---------------SFDGVTR-GSYSYLDAENKLQTVTYTAdALNGF 76  yellow fever mosquito
Q9VV44  49 YSYGYSEPLS-SK------QETR---------------TLDGITQ-GYYSYRDAAGKLQTVNYVA-DNKGF 95  fruit fly
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