5CCL,5CCM,3MEK,3OXG,3PDN,3QWP,3RU0,3OXF,5EX0,5EX3,5HI7,5XXG


Conserved Protein Domain Family
SET_SMYD3

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cd19203: SET_SMYD3 
SET domain (including post-SET domain) found in SET and MYND domain-containing protein 3 (SMYD3) and similar proteins
SMYD3 (also termed zinc finger MYND domain-containing protein 1) functions as a histone methyltransferase that specifically methylates 'Lys-4' of histone H3, inducing di- and tri-methylation, but not monomethylation. It also methylates 'Lys-5' of histone H4. SMYD3 plays an important role in transcriptional activation as a member of an RNA polymerase complex. It is overexpressed in colorectal, breast, prostate, and hepatocellular tumors, and has been implicated as an oncogene in human malignancies. Methylation of MEKK2 by SMYD3 is important for regulation of the MEK/ERK pathway, suggesting the possibility of selectively targeting SMYD3 in RAS-driven cancers.
Statistics
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PSSM-Id: 380980
Aligned: 23 rows
Threshold Bit Score: 285.798
Created: 7-Jun-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ###                                                                   
5CCL_A         4 LKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKgsrgvvcdrcllgkeklmrcsqcrvaky---csakcqkkaw 80  human
XP_004914684   4 GILEKFQSPGKGNGVRALKDMSHGLTVMIAEPYVYTVCRiktacdhclhrkekllrcsqckvtryc-----nshcqrkaw 78  western clawed ...
XP_005992994   3 RRVGRFQSAGKGNGLRALTHTSPGQLLYTAEPFAYTVSKrargtvcehclsrkeqllrcsqckvary---cdancqrqaw 79  coelacanth
XP_018605860   3 SRVERFCSQGKGHGLRALVPLKAGELVFTAQPYAHTVSKsamkttcancfsrketllrcsgcktarycnpacqrqawpeh 82  Asian bonytongue
OPJ72654       4 AALERFCSPGKGSGLRARRRVRPGELLYRAEPFAYVVTKeqlggvcerclrrsehlhrcsqckvaky---cgkscqkeaw 80  Patagioenas fas...
5XXG_A         2 LKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKgsrgvvcdrcllgkeklmrcsqcrvaky---csakcqkkaw 78  human
KNC87053       3 SNWEVSTTSHKGRYIRAKLPLTRGTLVLKSDPFAYTVTNkqkalrcsaclkaseglr----------------------g 60  Sphaeroforma ar...
XP_001627600   6 SVFEVFETESKGRGLRAAKPLKSGDTILSEQPVVYMLSNmlrgqrcdfcleklsdlq----------------------r 63  starlet sea ane...
XP_012566679   5 QVYEVFETEEKGRGVRALQDIKRGVEILKEEPLACILTNskyrgircdycysepekll---------------------k 63  Hydra vulgaris
EEN50900       3 DGVEIFSSAEKGRGLCATKVFKPGNLVRAADPYAYVLCNsergkrcdfcfarkddmsrcsgckfary---cdgkcqkaaw 79  Florida lancelet
Feature 1                                                                   #     # #            
5CCL_A        81 pdhkreckclksckpryPPDSVRLLGRVVFKLMDGAPs----------------eSEKLYSFYDLESNINk--------- 135 human
XP_004914684  79 qghkreckclrstlpnvPPNSVRLVGKIIFKMLQKPDt----------------aSEELYTISDLQSHIKe--------- 133 western clawed ...
XP_005992994  80 pdhkqeckclksiqpklPTDSVRLIGRIIFKLLRQSSc----------------lSEELYSLSDLEFHIKe--------- 134 coelacanth
XP_018605860  83 kreckclrsllpripgtLHDSVRLVARVIFRLLDPKPs----------------pAEQLYSLVELESHVSe--------- 137 Asian bonytongue
OPJ72654      81 ldhkqecrclknikpnfPPDSVRLAGRIVFKLLRQSVc----------------lSERLYSFSDLQTNIEq--------- 135 Patagioenas fas...
5XXG_A        79 pdhkreckclksckpryPPDSVRLLGRVVFKLMDGAPs----------------eSEKLYSFYDLESNINk--------- 133 human
KNC87053      61 cgrckklyfcnsqcqrrAWPRHKQECKAICASQKVALdamsivchavwraaadkkTLFDSDFGVLQSNRRl--------- 131 Sphaeroforma ar...
XP_001627600  64 csrckfarycgascqraAWRIHKSECERLKRVFPRVPtdlvllm-----frvwqlKSQNGWYDSLVSNVEk--------- 129 starlet sea ane...
XP_012566679  64 cskckfiaycgkvcqasDWKMHKYECKCLTKSAPKQPp----------------dFCRLVSQLIFNFYYNkkntlinnly 127 Hydra vulgaris
EEN50900      80 tehksecksiktvkpetPTDSIRLIARIINKTKTDSP------------------GVPGNSIDELQSNLRe--------- 132 Florida lancelet
Feature 1                                                         #####       #         #####    
5CCL_A       136 -----lTEDKKEGLRQLVMTFQHFMREEiqdasqlPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDP 210 human
XP_004914684 134 -----aSEEVKDGLRHLATALQHYLKEEiqeisqlPPGFQVLEYFGKVTCNSFTISDGEMQDVGVGLYPSMSLLNHSCDP 208 western clawed ...
XP_005992994 135 -----mSEEMIKGLGDLTLMLQVYLREEiqdasqlPPGLNILHLFAKVTCNCFTLSDGEMQEIGVGLYPSMSLLNHSCSP 209 coelacanth
XP_018605860 138 -----mGAEKMEGLEQLCTMLLLYLKEEvsdlsqlPPGLGPIDLFAKVTCNCFTISDGELKEAGVGLYPSMSLLNHDCKP 212 Asian bonytongue
OPJ72654     136 -----lSEEMKDALRHLAQTLQLYLKTEiqdasylPPAVDFFQIFTKVTCNCFTISNGEMQDVGVGLYPSMSLLNHSCDP 210 Patagioenas fas...
5XXG_A       134 -----lTEDRKEGLRQLVMTFQHFMREEiqdasqlPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDP 208 human
KNC87053     132 -----qSTDDDVAQAPTAMLIRTYLESSgieasqiPSIGDAMNALSVIKTNSFTILDDEMMECGVGIYPLASNFNHSCDP 206 Sphaeroforma ar...
XP_001627600 130 -----iDSDAKEDFVSVLMVLNEYLGSE-------ISPPEGLELFSKISCNSFAICDGEMQAIGTGIFPNAVCLNHSCAP 197 starlet sea ane...
XP_012566679 128 ankgniSNARKEAFFTFAAVLVEYLQDVni----nINDIDIYGLMCKASCNSFAITNAELNSLGTGIFSSASLFNHSCDP 203 Hydra vulgaris
EEN50900     133 -----mPENVKEMFAQLAVVLRMYVGKDv-----mDDAREIFELFGRMTCNTFSICDPEMQYIGIGIYPKMSLFNHSCEP 202 Florida lancelet
Feature 1                                  # # #               # #         
5CCL_A       211 NCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQT 268 human
XP_004914684 209 NCVIVFEGTCLLLRTVKEIPKGEELTISYIDVKMPTQGRRDQLQRQYCFLCDCQRCLL 266 western clawed frog
XP_005992994 210 NCVIVFDGRRLLLHATQEIQANEELTVSYIDVLAPTQERQSQLKSQYCFTCDCQRCQA 267 coelacanth
XP_018605860 213 NCVVMFEGVQLHLRAIQEIKALEELTISYIDVVMPSEDRKRQLQKQYHFLCKCVRCTT 270 Asian bonytongue
OPJ72654     211 NCVIVFEGYQLLLRSVREIQIGEELTISYTESLMPTSERQKQLMRQYCFECDCLLCQN 268 Patagioenas fasciata monilis
5XXG_A       209 NCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQT 266 human
KNC87053     207 NVVITFNGFELQARLIRNVHTGDEMTISYIDNAKPREERRNQLRKQYYFNCDCSLCGD 264 Sphaeroforma arctica JP610
XP_001627600 198 NSVAVFNGTNIYIKALEEIPVGEELTISYIQQLHPRETRQEELQTQFCFYCQCHRCLD 255 starlet sea anemone
XP_012566679 204 NCVATFNGRDISIRAIKPIAEGEELMLSYISILATSDVRQLELRESYMFTCKCTVCSR 261 Hydra vulgaris
EEN50900     203 NCVAVFNGLRMEVRAIQNIQPGEELLISYVEMLAMSSVRKQQLLQQYYFTCKCPRCQD 260 Florida lancelet

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