2JUN,2FFW


Conserved Protein Domain Family
Bbox1_MID1_C-I

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cd19836: Bbox1_MID1_C-I 
B-box-type 1 zinc finger found in midline-1 (MID1) and similar proteins
MID1, also termed midin, or midline 1 RING finger protein, or putative transcription factor XPRF, or RING finger protein 59 (RNF59), or tripartite motif-containing protein 18 (TRI18), is a microtubule-associated E3 ubiquitin-protein ligase implicated in epithelial-mesenchymal differentiation, cell migration and adhesion, and programmed cell death along specific regions of the ventral midline during embryogenesis. It monoubiquinates the alpha4 subunit of protein phosphatase 2A (PP2A), promoting proteosomal degradation of the catalytic subunit of PP2A (PP2Ac) and preventing the A and B subunits from forming an active complex. It promotes allergen and rhinovirus-induced asthma through the inhibition of PP2A activity. It is strongly upregulated in cytotoxic lymphocytes (CTLs) and directs lytic granule exocytosis and cytotoxicity of killer T cells. Loss-of-function mutations in MID1 lead to the human X-linked Opitz G/BBB (XLOS) syndrome characterized by defective midline development during embryogenesis. MID1 belongs to the C-I subclass of TRIM (tripartite motif) family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a RING finger, Bbox1 and Bbox2, and a coiled coil region, as well as a COS (carboxyl-terminal subgroup one signature) box, the fibronectin type III domain and the SPRY/B30.2 domain positioned C-terminal to the RBCC domain. The type 1 B-box (Bbox1) zinc finger is characterized by a C6H2 zinc-binding consensus motif. MID1 heterodimerizes in vitro with its paralog MID2.
Statistics
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PSSM-Id: 380894
Aligned: 8 rows
Threshold Bit Score: 95.1279
Created: 10-Sep-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C H HClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #           #  #    #  #    #        #     
2JUN_A         2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEP 51  human
2FFW_A        29 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEP 78  human
O15344       115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEP 164 human
NP_989460    115 EKVLCQFCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEP 164 chicken
CAG05903     117 DRVQCQFCEQDPPQDAVKTCITCEVSYCDECLKATHPNKKPFTGHRLIEP 166 spotted green pufferfish
NP_001177812 116 EKVLCQFCDQDQAREAVKTCVTCEVSYCEDCLKATHPNKKPFTGHRLIEP 165 African clawed frog
XP_005998286 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEP 164 coelacanth
XP_007889908 115 EKVQCQFCEQDPPREAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEP 164 elephant shark

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