Conserved Protein Domain Family
CASIMO1_SMIM5

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cd20254: CASIMO1_SMIM5 
small integral membrane protein 5 (SMIM5) of CASIMO1
This family contains the small integral membrane protein 5 (SMIM5) variant of the Cancer-Associated Small Integral Membrane Open reading frame 1 (CASIMO1), a small open reading frame (sORF)-encoded protein (also known as a microprotein). CASIMO1 controls cell proliferation and interacts with squalene epoxidase (SQLE) modulating lipid droplet formation. CASIMO1 RNA is overexpressed predominantly in hormone receptor-positive breast tumors, and its knockdown has been shown to decrease proliferation in multiple breast cancer cell lines. Loss of CASIMO1 disturbs the organization of the actin cytoskeleton, leads to inhibition of cell motility, and stalls the cell cycle in the G0/G1 phase. CASIMO1 interacts with SQLE, a key enzyme in cholesterol synthesis and a known oncogene in breast cancer. This variant is expressed on chromosome 16 in humans, mostly in the stomach, kidney, thyroid and esophagus.
Statistics
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PSSM-Id: 380776
Aligned: 20 rows
Threshold Bit Score: 53.0795
Created: 4-Apr-2019
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q71RC9         5 DFVQEMRAVGERLLLKLQRLPQAEPVEIVAFSVIILFTA-----------------------TVLLLLLIACS------- 54  human
XP_012776296 116 SMDQQLQDIFRRVWTKLQALPEATPVEVGAFAVLLLFIA-----------------------TVLFMILLSCIh------ 166 zebra mbuna
PWA21724       2 EAKQEFESILQRVWSKLQGLPQAAPLESGAFSILLLFIA-----------------------TVLFLMLLSCFh------ 52  western mosquit...
XP_007429493   5 QFQKELSAIGYKLWLKLQRLPKAEPLEIVCFFIIVLFIA-----------------------TMLSMMIIACS------- 54  Burmese python
GCF56260       5 DFQNELYTIGEKLLNKFQRLPKGDILEIAFFFVIVLFIG-----------------------TILVMTIIACS------- 54  Paroedura picta
XP_020660765   9 DFQNELYTIGNKLWLKLQRLPKAEPLEIVSFLVVILFIA-----------------------TVLLMMIIACS------- 58  central bearded...
PIO28996       5 SIQEEVAKMGEKLLTKLSQIPQADTVEIISFTIIIVFIA-----------------------AVLVVAIIACS------- 54  American bullfrog
XP_015819227  80 DLREELLNKLHEVWIKLQGLPQASPLEQGAFAVVILFVG-----------------------AFLFMIVIGCM------- 129 turquoise killi...
XP_024259154   3 DAREEMLTLLQKLWAKLQGLPTASPLEMGAFAVLVLFIGcelndtqrkavfeiaedllehqfFIRTMCLSADAskemhvv 82  Chinook salmon
NP_001156477   2 STSQDIMGLLQNVWTKLQALPQDHPLTQAAFSIIVLFFL-----------------------TFLTMVVAGCVy------ 52  zebrafish
Q71RC9        55 -------CCCTHCCcp--erRGRKVQVQPT 75  human
XP_012776296 167 -------CCCFTKP------KHQPSRVQPL 183 zebra mbuna
PWA21724      53 ------cCCCGGKP------KYQSSRVQPL 70  western mosquitofish
XP_007429493  55 -------FCCSRCGdgspkpKGKKIHVQPA 77  Burmese python
GCF56260      55 -------FCCFNCGsp--dpRGRKIRVEPA 75  Paroedura picta
XP_020660765  59 -------CCCARCCngrpqpKGRRIQVQPT 81  central bearded dragon
PIO28996      55 -------GCCCTNK------KRRTTRVQPK 71  American bullfrog
XP_015819227 130 -------HCCCGKP------KYQASRVQPL 146 turquoise killifish
XP_024259154  83 evqdrvgECCKPVPi-----ATLHPMCQPM 107 Chinook salmon
NP_001156477  53 -------GCCGCCS------PGTKKRVSTE 69  zebrafish
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