5TOD


Conserved Protein Domain Family
SMP_C2CD2L

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pfam18696: SMP_C2CD2L (this model, PSSM-Id:376120 is obsolete and has been replaced by 465835)
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Synaptotagmin-like, mitochondrial and lipid-binding domain
This is a lipid transport domain found in phospholipid transfer proteins such as C2CD2L-like (also known as TMEM24). The TMEM24-SMP domain is shown to bind glycerolipids with a preference for phosphatidylinositol (PI).The bound PI is then transferred to the plasma membrane (PM) where it is converted to phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] to replenish pools of this lipid hydrolyzed during glucose-stimulated signaling. PI(4,5)P2 is required for Ca2+-dependent exocytosis hence, the SMP domain of TMEM24 is essential for sustaining the intracellular Ca2+ oscillations that trigger bursts of insulin granule release and hence insulin secretion. The SMP domain belongs to a superfamily of lipid/hydrophobic ligand-binding domains called TULIP for (tubular lipid-binding proteins) it adopts TULIP fold with two alpha helices and a highly curved antiparallel beta sheet forming a cornucopia-like structure.
Statistics
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PSSM-Id: 376120
Aligned: 38 rows
Threshold Bit Score: 155.877
Created: 21-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5TOD_F        31 WQRAWVRALNEQACRNGSSIQIAFeEVPQLPP-RASISHVTCVDQSEHTXVLRCQLSAEEVRFPVSVTQQSPAAVSXETY 109 human
XP_005988230  98 WQKVWINALNEQACRIGSSVQITFeESP-QLMsSSSVSQVTCMDQSERSMVLQCHVSADAVRFPVSVTQQSPAAVSMDTY 176 coelacanth
XP_016380258 105 WQRAWVRALNEQACRQGSSIQITF-DDSLQLPtSASIDRVTCTDQSIRSMVLQCNCSVGNITFPLTVTQQSPAAVSMDTY 183 Sinocyclocheilu...
XP_009303775  74 WRRAWFRSLNEEACRSQSGIQLTFeDDGVQSS-ELAVDQISSFTKTRGQKNVLCQVVGNKLQFSLSAFPSSTTSQTPLRY 152 zebrafish
Q08BC9       105 WQRAWVRALNEQACRQGSSIQITF-DDSLQLPtSASIDRVTCTDQSVRSMVLQCNCSVDTVSFPVTVTQQSPATVSMDTY 183 zebrafish
XP_006119780  90 WQRAWVRALNEQACRHGSSVQITFeENP-QLPaAVNISHVTCTDQADHSMVLHCHLSANAVKFPVSVTQQSPAAVSMDTY 168 Chinese soft-sh...
XP_016159295  80 WQRAWVRALNSQARRHGSSVQITF-EEGHQLPqAANISCVTCKGQSDHGIVLCCHLSAEAVKFPVSVTQQSPVAVSVDTY 158 collared flycat...
XP_014912253 111 WQRTWVKALNEQACRHGSSLQITF-DSSLQLTaGSAIDSVTCTDQSANKMVLRCKCWVDTLTFPVTVTQQSPAAVSMDTY 189 sailfin molly
XP_013127769 102 FQRTWVKALNEQACRHGSSIQITF-DSSLQISaASAIESVSCTDQSANRMILHCNCSVDRVTLPVTVTQQSPAAISMDTY 180 Nile tilapia
XP_015193045 109 WQRTWVRALNEQACRNGSSIQITF-EDSLQLPsSASISHVTCTDQSEQSMVLQCHCAVDTVAFPVTVTQQSPAAVSLDTY 187 spotted gar
5TOD_F       110 HVTLTLPPTQLE-VNLEEIP-GeGLLISWAFTDRPDLSLTVLPKLQARe--rGEEQVELSTIEELIKDAIVSTQPA 181 human
XP_005988230 177 QVSLTLQRTQLE-ICMEEVEnE-GLLVSWTFRERPNLSVTVSPKLQQRe--eNDGKVDVSTIQELIEDTIVSTQPA 248 coelacanth
XP_016380258 184 QITMKPMQAQLQvCLEEVEE-E-GLLVSWTFSKQPHLSLTVTPCQRVQke-gSDVEVDSEMISALVEDTLYTTHPA 256 Sinocyclocheilus rh...
XP_009303775 153 SVKISPLHLQLA-LQMKEVN-G-EVEISWRVLHLDSVDLQLMPSFAQGdcqsLSDAAVTDR----LRQVLNGAQAS 221 zebrafish
Q08BC9       184 QITMDPMQAQLQ-VCLEEVE-EeGLLVSWTFSKQPHLSLTVTSRQRAQke-gSDVEVDSDMIAALVEDTLYTTHPA 256 zebrafish
XP_006119780 169 QVTLALLQAQVE-IRLEEMK-NeGLLVSWTFKDRPDLNLSVVPKLHPRe--kNDGKVDLSTIKDLIEDSIVSTQPA 240 Chinese soft-shelle...
XP_016159295 159 HVTLAVLQAQVE-IHLEEIQ-NeGLLVSWTFKDRPDLDFLVLPR-LELp--aDERRADLSTIKDLIEDTIVSTKPA 229 collared flycatcher
XP_014912253 190 QITTAPMMAKVD-VSLEEVE-DeGLLISWTFSKQPSFSLTVSPCKLQRq--rSEATADLDMIKGMVEDTLFSAHPA 261 sailfin molly
XP_013127769 181 QITIAPVVAKVV-ACLEEVE-DeGLLISWSLSKQPSFSLTVSPCKLQRr--gTEGEADIDTIKGLIEDTLFSTQPA 252 Nile tilapia
XP_015193045 188 QVAMAPMEAQLV-ICLEEVE-EeGLLVSWTFSQQPLLSLTVTPRRIQKd--vNDGKVDLGTIGELVRDTIVSTQPA 259 spotted gar
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