3L4H


Conserved Protein Domain Family
HECW1_helix
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pfam18436: HECW1_helix (this model, PSSM-Id:375862 is obsolete and has been replaced by 465766)
Helical box domain of E3 ubiquitin-protein ligase HECW1
This is a region of 109 amino acids found in HECW1 proteins in Eukaryotes.Polymorphisms in the same region in the C.elegans homologue affects C. elegans behavioural avoidance of a lawn of Pseudomonas aeruginosa.
Links
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Statistics
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PSSM-Id: 375862
Aligned: 10 rows
Threshold Bit Score: 85.1687
Created: 20-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3L4H_A          1 LLLQSPAVKFITNPE-FFTVLHANYSAYRVFTSSTCLKHXILKVRRDARNFERYQHNRDLVNFINXFA 67   human
8_pfamImport    1 VLNRSPPVRFITRPD-FFSTLHLNEDAVIMYNSNSSLKHMITKIRRDSHAFERYQHNRDLVAMLNLFA 67  
KFO09696      834 LLLQSPAVKFITNPE-FFTVLHANYSAYRVFTNSTCLKHMILKIRRDARNFERYQHNRDLVNFINMFA 900  East African grey crowned...
XP_001641445   11 aLLNSPAVKFITRPD-FVDFIKNSGVAGQYYFQSQMLKLIVSKIRSDPAQFERYRHQVELVRFLNQFA 77   starlet sea anemone
KFM79717     1075 LLLRSPAVRFLTRPD-FLNVLHMNDEALAVYNRSSSLKHMITKIRRDPSGFERYQHNRDLVSLLNKFA 1141 Stegodyphus mimosarum
KFO29990      756 AMVMSPAVS-MAAPQvNPGSLSSPQSAYRMFTNNTCLKHMITKVRRDTHHFERYQHNRDLVGFLNMFA 822  Damara mole-rat
XP_009302977  831 LLLQSPGAKFLSSPD-FFSVLHSNPSAYRMFTSNTCLKHMISKVRRDAQHFERYQHNRDLVNFLNLFS 897  zebrafish
KIH52192       42 LMLPASLTALRLRP--FL------QAALAAYNASPIVKHIVHRIRKCGEPTEKYENNRDFVAFVNLFA 101  Ancylostoma duodenale
XP_011681117 1002 SLMESPAVLFITRPD-FFNFLHSNMDAKNTFQKNSSVKHMVNRIRRDPGKFADYQHNRDLVALLNSFA 1068 purple sea urchin
EFX88626      106 DLLNSPALRFVTRPD-FFSLLHNNDEALRLYNRNPAIRQLLSKVWRNPSSFQRYQHNREIVTLLNLFA 172  common water flea
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