Conserved Protein Domain Family
Dynein_AAA_lid

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pfam17852: Dynein_AAA_lid (this model, PSSM-Id:375381 is obsolete and has been replaced by 465532)
Dynein heavy chain AAA lid domain
This entry corresponds to the extension domain of AAA domain 5 in the dynein heavy chain. This domain is composed of 8 alpha helices.
Statistics
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PSSM-Id: 375381
Aligned: 315 rows
Threshold Bit Score: 41.1113
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGB11675     1268 LTGLYL-WLV--E-PAMAFL-RRSCKEMSPTVDSAL-LSSLLNFLECVLTAAIPGKHDvaddasHLEGGSRKKHVECAFL 1341 Aureococcus a...
KFM27022     2014 LRPLFD-RLV--A-PLLDHV-RSACTPIMPVEACGL-VGTLLTLLTGMLDGVASSAPDgg---aAMTPTQAP-QLESVVL 2083 Auxenochlorel...
EGD79261     2837 LQPLFD-RYM--G-TMLEVV-STIEDHVMQVSMTCR-VRTTLDLLSALLSD--SVNAA---------IILPPIHVECAFL 2899 Salpingoeca r...
EDQ92908     2771 LRDLIN-KIF--L-PMVEYL-QENQPHAVIAVALSTqVRTFSQLLTALLANSVSAA-----------MILPEDNIECYVL 2834 Monosiga brev...
KEP64669     2218 LTPLFE-KYLfgA-NTLDFA-LRELRHVMPVSAQIL-TVQVLNLLAALLRHFETRNES-------LTSM----QYERVLT 2282 Hammondia ham...
KNC53171     2919 LAPFFA-SLL--S-PVLEFL-RHTPTTVVLQPESAR-VRTMLSLLDALLEQGALNNEV-----------FEEDHLERLFI 2981 Thecamonas tr...
CEL99590     2373 LKELFDkYMI--EpDIFDFI-MRNCRPVMPTSNAAM-TLQVMNLLTGILQPHVEANEVl-----------QRPAYENIMT 2437 Vitrella bras...
CEO98004     2325 VSKLFDrYIV--EgDILSFL-ARSTTAVMAASDVQY-VTNCFQLVEALLSSSVERQVV-------YNAD----QIERLFL 2389 Plasmodiophor...
CDW74983     2334 VNEFFEkYFV--K-PDLFTLlVKNFIYVMYSPPVLR-ISQLLNLITALLQQFLDKQEQl-----------DKPSFEKIFV 2398 Stylonychia l...
XP_011671381 3099 LQKAFN-KTM--D-AVVNYV-LFETKPLATLTEVGT-FKTCLGLLESMLNEHIEIG--------------GELHIERLFL 3158 purple sea ur...
EGB11675     1342 FALIWSSGVTADNAGRAKYSAFVREIMEsvdvlddaryqgvtnAL--AvrgwkrpkfaeaeegefdgkvecgPPADGDLQ 1419 Aureococcus a...
KFM27022     2084 FCLAWSLGGLLENADRTGFDAKLRNLSQ----------------AapPl----------------------dGSGLSTIY 2125 Auxenochlorel...
EGD79261     2900 FAITWGLGGTLEIQGRKLFHTELGKLSSl-----------------iPn-----------------------DNDELTMF 2939 Salpingoeca r...
EDQ92908     2835 FATTWSLGGGLHETERAPFHEAMNKLSLl-----------------lPd-----------------------EQSGLTVF 2874 Monosiga brev...
KEP64669     2283 YALTWGVGGLLETEDRLRFDAFLKSLGA----------------PhaC-------------------------EEGLTLF 2321 Hammondia ham...
KNC53171     2982 FALAWGIAGALPHTDRLRLQTFLSSA-T----------------VnlPr-----------------------FEGSETIF 3021 Thecamonas tr...
CEL99590     2438 YAIVWGCGGLFEPDDRMKLDGFLRDKSK----------------VpyP------------------------CQDGLTLF 2477 Vitrella bras...
CEO98004     2390 YALVWSVGGLLEQDDRAKLNGFLAGVAP---------------AGamPd-----------------------ASNGLTLY 2431 Plasmodiophor...
CDW74983     2399 YSVAWAIGGLFETEEREKFHKFLEQRNAp-----------------lPpisa-----------------qkmSVDKETVF 2444 Stylonychia l...
XP_011671381 3159 FCLIWTFGGLLEGSDRKGFSDLLRTLTSa-----------------lPd-----------------------YDHDISVF 3198 purple sea ur...
EGB11675     1420 DWCYDPRGGKWVNWVD 1435 Aureococcus anophagefferens
KFM27022     2126 DYVYDVAGARWTPWVQ 2141 Auxenochlorella protothecoides
EGD79261     2940 DYCLSPS-ADWETWED 2954 Salpingoeca rosetta
EDQ92908     2875 DYNISPL-ADWESWAE 2889 Monosiga brevicollis MX1
KEP64669     2322 DYWVELETKTFQKWSA 2337 Hammondia hammondi
KNC53171     3022 DFYVQEASTHWELWVH 3037 Thecamonas trahens ATCC 50062
CEL99590     2478 EYGVHDASHEFQLWQA 2493 Vitrella brassicaformis CCMP3155
CEO98004     2432 DYVVDAKTLEWRPWQA 2447 Plasmodiophora brassicae
CDW74983     2445 DYYVDPNNKSWKLWEA 2460 Stylonychia lemnae
XP_011671381 3199 DYYVDES-GEWDPWIS 3213 purple sea urchin
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