1IMO


Conserved Protein Domain Family
LIG3_BRCT

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pfam16759: LIG3_BRCT (this model, PSSM-Id:374781 is obsolete and has been replaced by 465260)
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DNA ligase 3 BRCT domain
The BRCT domain of DNA ligase 3 (LIG3) binds to the C-terminal BRCT domain of the scaffolding protein X-ray repair cross-complementing protein 1 (XRCC1) and mediates homo- and heterodimerization.
Statistics
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PSSM-Id: 374781
Aligned: 17 rows
Threshold Bit Score: 91.2289
Created: 25-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IMO_A         12 VLLDIFTGVRLYLPPST-PDFSRLrRYFVAFDGDLVQEFDMTS-------ATHVLGSrD------------------KNP 65   human
EEN69839      848 VLPDVFCGIKLFLPDTV-ENYALLrRYFVAYDGDIVQDYAMSQ-------ATHVVED-Peqk------------nmnGKT 906  Florida lancelet
XP_015839105  353 SIPNYFENVRLFLEEGVkERHAQWvKYFIAYGGSVLTNDKPEE-------ATHVLHLkDtisq----------ptihCAN 415  red flour beetle
EEB12512      807 PLPNIFTGCVIQIPKEY-KNYDLLrRYLIAYDGKLYDPEKETSvengknkVTHVIHLnKvgkiv--------knekyWDK 877  human body louse
Q1RL58        781 FLNDIFLGVKIFIPTDV-EKRKKMeRHILAFNGDVLGNDQFKE-------ATHIVQC-Dsvk------------vadIPI 839  vase tunicate
5_pfamImport    1 FLKDTFEGVKIFIPNDV-QNRSKMvRYIKANNGDVLKENELKL-------ATHVVQS-Dsvk------------rldISS 59  
EFC36317      824 SLCDLFTDMVMYIHKDV-PALKMHtRYIIAFDG-IVESSFSDD-------ITHIITSsSritpei-------aklvsENP 887  Naegleria gru...
EGD81001     1151 PLKNVFHGVTCFISDAV-PDYSKAyRYGTAFGAELVN-AMGGD-------VTHVVVPdLdvdkwdaa--tksavsmaSST 1219 Salpingoeca r...
XP_001943689  779 RLPDLFTGIRVVVPDSI-SKNTFL-RYFIAYGGTPLNSSNELA-------PTHVIVQkKehnrssekpmkeekkekkKSL 849  pea aphid
XP_017953228  883 TLLDIFTGVKLHIPSTL-DDFAKLrRYFIAFDGDLVPEYDLPT-------ATHVMGRePe-----------------CIA 937  tropical claw...
1IMO_A         66 AAQQVSPEWIWACIRKRR 83   human
EEN69839      907 DAQLVTVDWLWQCIKRKQ 924  Florida lancelet
XP_015839105  416 SAKHVIVEWIKDTVAEEN 433  red flour beetle
EEB12512      878 GVRHVHVNWIWNSIKLLD 895  human body louse
Q1RL58        840 SASLVTASHVWECIKNKV 857  vase tunicate
5_pfamImport   60 EALSVTSKYVWECIQNEN 77  
EFC36317      888 QVNVVSSEWIWHSINTST 905  Naegleria gruberi
EGD81001     1220 GARVVTAKWLWDSIKRRT 1237 Salpingoeca rosetta
XP_001943689  850 NATAVCAQWFWDSIRKGT 867  pea aphid
XP_017953228  938 DAKHVTPHWIWECIRRRR 955  tropical clawed frog
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