Conserved Protein Domain Family
HIP1_clath_bdg

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pfam16515: HIP1_clath_bdg (this model, PSSM-Id:374595 is obsolete and has been replaced by 465154)
Clathrin-binding domain of Huntingtin-interacting protein 1
HIP1_clath_bdg is the coiled-coil region of Huntington-interacting proteins 1. It carries a highly conserved HADLLRKN sequence motif at its N-terminus which effects the binding of HIP1R to clathrin light-chain EED regulatory site. this binding then stimulates clathrin lattice assembly. Huntingtin-interacting protein 1 (HIP1) is an obligate binding partner for Huntungtin, and loss of this interaction triggers the cascade of events that results in the apoptosis of neuronal cells and the onset of Hungtinton's disease. Clathrin light-chain binds to a flexible coiled-coil domain in HIP1 and induces a compact state that is refractory to actin binding.
Statistics
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PSSM-Id: 374595
Aligned: 34 rows
Threshold Bit Score: 83.0557
Created: 25-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_015221895  467 HAELLRKSADTVKMLSATQQTQEEVARTKQQLTFEMERIKQEAEMKLEEQKFDMEKLKRELGERKTELLRVQNTLLSNEK 546  spotted gar
ETE73723      450 HADLLRKNAEVTKQVTMARQVQSDTERDKKELEDSFQRLSEQAQRKTQEQAEILETLKRELIASKQELQCLQSTVDSTAQ 529  king cobra
6_pfamImport    1 HADLLRKNAEVTKQVSVARQAQVDLEREKKELEDSLERIGDQGQRKVSGRRSARE-MKEAHTRNNGRTQRLPLSLRSPFQ 79  
XP_005986931  484 HADLLRKNAEVTKQVTVARQAQGDAERLRKELEDNVQRFQEQTQQKTQEQTETLKSFQMELTASRQELETLKASLQTSTQ 563  coelacanth
XP_007663553  420 HADLLRKNAEVTKQVTVARQAQGDVEREKKELEHSFQRVSEQAQRKTQEQTEVLETLKRELAASKQELQTVKGTLETSAQ 499  platypus
XP_016158360  446 HADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRVSEQAQRKSQEQAEVLETLKRELATSRQELQVLQGTLESSTQ 525  collared flyc...
XP_023359551  450 HADLLRKNAEVAKQVTVMRQAQADLQREKKELEDTFHRANEQAQRKTQEQTEVLETLKQELAISKHEFQVLQGTLETSAQ 529  Tasmanian devil
XP_008533277  275 HADLLRKNAEVTKQVSVARQAQVDLEREKKELEDSFQRLSEQAQRKTQEQTEVLENLKQELATSKQELHIVQGSLETSAQ 354  Przewalski's ...
XP_021584257  452 HADLLRKNAEVTKQVSVARQAQVDLEREKKELEDSMERvssqaklkTQEQQGILESLKQELTTSRQELQLLHSSLDTSAE 531  thirteen-line...
XP_023371512  359 HADLLRKNAEVTKQVSMARQTHIDLEREKKELEDTLERISEQGQRKTQEQLEVLESLKQELNTSKVELQVLQSSLETSAQ 438  small-eared g...
XP_015221895  547 AGEKLSGTLEGLQAEKEVL 565  spotted gar
ETE73723      530 FEAEHTTHLAALKQEKDIL 548  king cobra
6_pfamImport   80 SEANWAAQITELEKERDSL 98  
XP_005986931  564 SSTELASKVSSLELEKSSL 582  coelacanth
XP_007663553  500 SEAERGAQLAGLEAERASL 518  platypus
XP_016158360  526 AGAEQSTRIASLEQERDRL 544  collared flycatcher
XP_023359551  530 SEAKWTLQVEGLERERASL 548  Tasmanian devil
XP_008533277  355 SEEKWATQIAELEKERDSL 373  Przewalski's horse
XP_021584257  532 SEAKWTMKVAELEEERGSL 550  thirteen-lined ground squirrel
XP_023371512  439 SEVKWANQITDLEKERANL 457  small-eared galago
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