Conserved Protein Domain Family
CARMIL_C

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pfam16000: CARMIL_C (this model, PSSM-Id:374283 is obsolete and has been replaced by 464966)
CARMIL C-terminus
This domain is found near to the C-terminus of leucine-rich repeat-containing proteins in the CARMIL family. In leucine-rich repeat-containing protein 16A (LRRC16A) it includes the region responsible for interaction with F-actin-capping protein subunit alpha-2 (CAPZA2).
Statistics
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PSSM-Id: 374283
Aligned: 36 rows
Threshold Bit Score: 187.215
Created: 24-Apr-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELV13472       96 AESLCPSVMRRAHIRQDLIHASTQKVSVPRTFVKNVLLEQSGADIFNKISEVKLTVASFLSDRIVDEILDALSGCHHKLA 175  Chinese tree ...
XP_016284235  767 TQELCPVAMRVAEGHNKMLSSVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNSIVDEILQELYHSHKSLA 846  gray short-ta...
XP_017832501  778 TQELCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNSIVDEILQELYHSHKSLA 857  white-tufted-...
XP_014342943  752 TQELCPNAARSAEGHQKMFSSISDQVTIPRNFVRSVLLEQAGVDIQNKLNEVKLTVVSYLTNSIVDEILQELYLSHKKLS 831  coelacanth
XP_025282327  819 tRSLCPQMLQGPRWREQLEGVLVGSRGLPE-----LLPEHLLQDAFTRLRDMRLSVTGTLAESIVAQALEGLNAARDRLV 893  dingo
XP_003587270  783 TRSLCPQTLQGPRWREQLEGVLGGSRGLPE-----LLPEHLLQDAFTRLRNMRLSVTGTLAESIVAQAVAGLSAARDRLV 857  cattle
XP_012360163  806 ARSLCPQMLQGSSWREQLEGVLAGSRGLPE-----LLPEQLLQDAFTRLRDMRLSITGTLAESIVAQALAGLSAARDRLV 880  northern whit...
XP_019675475  783 tRSLCPQMLQGPRWREQLEGVLVGSRGLPE-----LLPEHLLQDAFTRLRDMRLSVTGTLAESIVAQALEGLNAARDRLV 857  domestic cat
XP_020949748  783 tRSLCPQMLQGPRWREQLEGVLVGSRGLPE-----LLPEHLLQDAFTRLRDMRLSVTGTLAESIVAQALAGLSAARDRLV 857  pig
XP_012666569  782 TRSLCPQILQGSGWREQLEGALVGSRGFPE-----LLPEQLLQNAFTRLRDMRLSVTGTLAESIVAQALAALSAARDRLV 856  small-eared g...
ELV13472      176 DH---SSRRgqtlpQHKSP-EREPAEE---RpakgpAALVEelseleqlEDLDDLDTCM------VTP-KSKRKSIHSR- 240  Chinese tree ...
XP_016284235  847 RH---LAQLrt-lsEPPGG-GGPGQEVssqArgrgrHDHEE--------TTDDELGTNI------DTM-AIKKQK-RCR- 904  gray short-ta...
XP_017832501  858 RH---LTQLrt-lsDPPGG-PGQGQDLssrg--rgrNHDHEe-------TTDDELGTNI------DTM-AIKKQK-RCR- 914  white-tufted-...
XP_014342943  832 RH---MTQIrk-laEQEAGiMGILQDKpgt----nrQREAEd-------MTDDELSTSI------DTI-AIRRQTVHSR- 888  coelacanth
XP_025282327  894 EN---LARQat-vaMPLAIpALDGGETsplGp--------------------gELEGLFfpeevkEKQ---------EDe 940  dingo
XP_003587270  858 ES---LAQQat-eaMPPVIpALDGDESsplGp--------------------gELEGLFfpe-ekEKD--------DEEe 904  cattle
XP_012360163  881 ESlaqQat----vtMPPALpAPDRGEPsllEpw--------------------eLEGLF--------F-PEENEEEKEK- 926  northern whit...
XP_019675475  858 ES---LAQQat-vtMPPAIpALDGGEPsplGpg--------------------eLEGLFfs---eEVR-EKQKDEEEQK- 908  domestic cat
XP_020949748  858 ES---LAQQat-eaVPPVVpAVEGGDPsplGpr--------------------qLKDLF------FPEeKEQEDEEDQK- 906  pig
XP_012666569  857 ES---LAQQaa-vaMPSTLpTLDGGEPislGp--------------------gELESFVfpe-ekEEE-DMEKERKKEK- 909  small-eared g...
ELV13472      241 ----MLRPVS------------RAFEM-EFDLDKALEEV---P-IHVEDlpf-------psVRP-EK-------RGSGFI 284  Chinese tree ...
XP_016284235  905 ----KIRPVS------------AFISGsPQDMEGQLAGLgvpP-GWFSA------------LGGnQpa----ssGSWEGL 951  gray short-ta...
XP_017832501  915 ----KIRPVS------------AFISGsPQDMESQLGNLgipP-GWFSG------------LGGsQpt----asGSWEGL 961  white-tufted-...
XP_014342943  889 ----KIRPVS------------TFISMsELDLDRQTLES---PsGLLSS------------STSsQYshs--rsTSFEAL 935  coelacanth
XP_025282327  941 eeqkDDSPPQkwpessqclhlvPSTHSaAE--EPEPELA-----APGEDaepqagpsargsPSPaAPgpqag----plpr 1009 dingo
XP_003587270  905 q--kDESPPQkwpeslhclhldSSTHSaAEELEPEPELA-----APGEDaepqagpsargsPSPaAPgppag----plpr 973  cattle
XP_012360163  927 ----DDSPLQkwpelshglhlvPFIHSaAEETEPEPELA-----APGEDaepqagpsargsPSPaAPgppag----plpr 993  northern whit...
XP_019675475  909 ----HDSPPQkwpds--sqcfhLVLSThSAAEEPEPELA-----APGEDaepqagpsargsPSPaTPgpqagplPC---- 973  domestic cat
XP_020949748  907 ----DDSPPEkwp------vssHCLHThSAAEEPEPELA-----APGEDaepqagpsargsPSPaTPgpp--adPP--PR 967  pig
XP_012666569  910 ----DDSPSGkwpepshgfhlvSSIHSaAE--EPEPELA-----APGEDaepqagpsargsPSPaAPgppag----alpr 974  small-eared g...
ELV13472      285 SELPSEEGRKLEHFTKLRPRRNK--KQQPTQT----AVCavnavPHDGEQNGLMgrVDEGVDEFFTKkvTrmd----skR 354  Chinese tree ...
XP_016284235  952 SELPT-YGLQLRHQTQGRPRPPR--TTPPGPCr---PSAp---gPGTRQENGTAtrLDEGLEDFFSRrvMdesssyprtL 1022 gray short-ta...
XP_017832501  962 SELPT-HGYKLRHQTQGRPRPPR--TTPPGPSr---PSMs---aPGTRQENGMAtrLDEGLEDFFSRrvMdesssyprtL 1032 white-tufted-...
XP_014342943  936 IDLPT-EGTKLDHQTRVRPRPRRnnRQPPSKPppaqVTDp----LRQEDKNGSR--IDEGVEEFFKKkvIpda-----nh 1003 coelacanth
XP_025282327 1010 MDLPPS-GQPLRHPTRARPRPRR--QHHHRPPp---GGPqv-ppALPQEGNGLSarVDEGVEEFFSKrlIqqd------r 1076 dingo
XP_003587270  974 MDLPPS-GQPLRHPTRTRPRPRR--QHHHRPPp---GGPqv-ppALPQEGNGLSarVDEGVEEFFSKrlIhqd------r 1040 cattle
XP_012360163  994 MDLPP-AGQPLRHPTRARPRPRR--QHHHRPPp---GGPqv-ppALPQEGNGLSarVDEGVEEFFSKrlIqq------dR 1060 northern whit...
XP_019675475  974 MDLPP-SGEPLRHPTRARPRPRR--QYHHRPPp---GGPqv-lpALPQEGNGLSarVDEGVEEFFSKrlIqq------ds 1040 domestic cat
XP_020949748  968 MDLPP-AGQPLRHPTRARPRPRR--QHHHRPPp---GGPqv-ppALPQEGNGLSarVDEGVEEFFSKrlIqq------dR 1034 pig
XP_012666569  975 MDLPPA-GQPLRHPTRARPRPRR--QYHHRPPp---GGPqv-ppALPQEGNGLSarVDEGVEEFFSKrlIqqd------r 1041 small-eared g...
ELV13472      355 SSAQGSESQELSE-GEEKKKRESRRSGFLHLIKPR 388  Chinese tree shrew
XP_016284235 1023 RTVRPGPGPAEAPlPPLQKKR---RRGLFHFRRPR 1054 gray short-tailed opossum
XP_017832501 1033 RTMR--PGLSEPPlPPLQKKR---RRGLFHFRRPR 1062 white-tufted-ear marmoset
XP_014342943 1004 PQTPRSRTESSSGePPPQKKRKGQKRSLFNFRKNR 1038 coelacanth
XP_025282327 1077 lwVPEEDPANEGGaTPVPRTLRKKLGTLFAFKKPR 1111 dingo
XP_003587270 1041 lwAPEEDPAAEGGtTPVPRTLRKKLGTLFAFKKPR 1075 cattle
XP_012360163 1061 LWAPEEDPATEGGaTPVPRTLRKKLGTLFAFKKPR 1095 northern white-cheeked gibbon
XP_019675475 1041 LWVPEEDSANEGGtTPVPRTLRKKLGTLFAFKKPR 1075 domestic cat
XP_020949748 1035 LWAPEEDPATEGGsTPVPRTLRKKLGTLFAFKKPR 1069 pig
XP_012666569 1042 lwAPEEDPATEGGtAPVPRTLRKKLGTLFAFKKPR 1076 small-eared galago
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