Conserved Protein Domain Family
GIDE
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pfam12483: GIDE (this model, PSSM-Id:372140 is obsolete and has been replaced by 403620)
E3 Ubiquitin ligase
This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length. There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis.
Links
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Statistics
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PSSM-Id: 372140
Aligned: 24 rows
Threshold Bit Score: 102.07
Created: 1-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
jgi:Cyan7425_1067  95 EERLTERDNDgetreKTQRGSETIASNSQSTPFFLQDQS-GAIEV--DPSGAAIETVQVLNE-F----RP-EA-GSARIS 164 Cyanothece...
Q2JPV3            267 STGREYLLER-----ETRTRDETLHSVVRQIPFFIEDET-GRVRV--DPTGAEIEAMSVVDEhI----FPgKGpSRFNFN 334 Synechococ...
Q8DMC2             88 ISREYEKEGS-------DRPSEIIGRHEQSTLFLLRD-HqGEIEV--NPFGAEIEAVQVLDE-L----RPaDQpHAFALS 152 Synechococ...
Q8DL39             91 VYKTTESHEDgs--sETKYRHEILSSNTQTIPFRLRD---GDMEIyvDPRGAEIETVQVLNE-Fq------EDnNTTHLA 158 Synechococ...
jgi:Caur_1130      93 EERITTQESGrs-ttRIERRSEQLEQNERRVPFTIRDDT-GQVLV--VPDGAKIDLIETANR-FletpQPwTGaTR---- 163 Chloroflex...
jgi:Haur_2908      94 EVVHDTDSEGrk-rtRTQTGSETIKSEEECAYFWINDNF-GKVWV--DPTDAEIEYEAGQNI-L----LPsPD-KASILH 163 Herpetosip...
tigr:trd_0254      80 TERVVERHGRs---kKGGRLSEVVAQNEQRIAFEVDDGT-GRVAV--DPVGAEIDGRKLLDR-F----EPvENgEGATLR 148 Thermomicr...
Q1ATI9             83 VVREYLERDRgdgapGSGRRSEVLARSERFAPFVVEDDT-GGVPV--SAEGAEVDAKKVVDR-F----ERgAGaAGLSVT 154 Rubrobacte...
jgi:Sthe_2360      86 EYEYRRRNAKge--tVRSRRSETVAHNEQFTPFYVED-SsGRVLV--DPEGAEVDAQKLVDR-F----ERnPGaLGPTIS 155 Sphaerobac...
jgi:Hneap_0006     88 VSVEHREQSFg---eSKRSDWRRIYQHESDNLIAVED-AtGECLV--DPESA--SIRPNMRR------QWyGAtERPSGV 153 Halothioba...

jgi:Cyan7425_1067 165 FGNFSLSVggsFPagreTIGYRYRESILPPDRRILIVATA-SDSSG-ILSLQKPVEkRQ--KFIISLKSEDHLAQSTQQT 240 Cyanothece...
Q2JPV3            335 LKRYLSGV---RTenrsTRAFIYKEWVIPVDAMAFTMGQV-RFEAG-DPVIRKPLS-GE--RFMIAPKSPEALLEEQRSN 406 Synechococ...
Q8DMC2            153 LGFLSFNWhfgKGt---TLGYRYQEWVLPLGQPVSVVGMA-SDQGG-VLRLQKPQNrGQ--KFIISLSFEDPLIQQYKQQ 225 Synechococ...
Q8DL39            159 FGRFQMDLsslPKhs-dTVGYRYEEWILPVNQQVFVVGTA-SDERG-KLRIRRPHQkGQ--LFFISLESEENLTKKVRQY 233 Synechococ...
jgi:Caur_1130     164 -----------------TLGQRQFERGLEVGIRVFVSGTAiDQNGQ-VVIARHPTNsKQ--TFIISRKSEHELANSAATW 223 Chloroflex...
jgi:Haur_2908     164 FGDFEFAApasNKgarrTTGYRAQEELFTDDGRAYILGCV-TDDEGePTIAYH-EKkLD--RMLVSRKTERELANSAAGW 239 Herpetosip...
tigr:trd_0254     149 IAGMSVEVraaEWr---TLGYRKIEEAVLVGYPVYVLGVLqDDG-----SIGRPPEgSRlrEFLISARSEEELATSLRRR 220 Thermomicr...
Q1ATI9            155 IGGATIDLgggER----TLGYRHTEEILPVDAPVYVLGAVrRDG-----GIGPPEEgAG--RFVVSWRSEEALGESLGRG 223 Rubrobacte...
jgi:Sthe_2360     156 LGGISLNLggdDG----TIGYRYQEHVLPVDIPVYVLGVVqEGG-----TIGRPPAaLKgrRFIISYRAEEALRESWGKK 226 Sphaerobac...
jgi:Hneap_0006    154 TNSVGGHF---------FGDYRYTEKLLLPHRNLYVLGWFkTIAHD---------------PYVVENESVASLLRAWKHD 209 Halothioba...

jgi:Cyan7425_1067 241 ATYTFYGMIAClglgailLVVG 262 Cyanothece sp. PCC 7425
Q2JPV3            407 ASSYLVGSVVL-------LGIG 421 Synechococcus sp. JA-2-3B'a(2-13)
Q8DMC2            226 KRKMTYASLGA-------TLCG 240 Synechococcus elongatus
Q8DL39            234 ARASIIAAGVF-------SGLG 248 Synechococcus elongatus
jgi:Caur_1130     224 ARNMRYAAIASgv---igLALV 242 Chloroflexus aurantiacus J-10-fl
jgi:Haur_2908     240 SRNLYYGAAGSav---agI-IF 257 Herpetosiphon aurantiacus DSM 785
tigr:trd_0254     221 SYLFLAGAITSf------VVAG 236 Thermomicrobium roseum DSM 5159
Q1ATI9            224 ARLLGLIALGLf-----lAGAA 240 Rubrobacter xylanophilus DSM 9941
jgi:Sthe_2360     227 ARWLGISAVALfalavilFVVA 248 Sphaerobacter thermophilus DSM 20745
jgi:Hneap_0006    210 PQMMKTFDL---------DGNG 222 Halothiobacillus neapolitanus c2
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