Conserved Protein Domain Family
KASH

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pfam10541: KASH (this model, PSSM-Id:371124 is obsolete and has been replaced by 463142)
Nuclear envelope localization domain
The KASH (for Klarsicht/ANC-1/Syne-1 homology) or KLS domain is a highly hydrophobic nuclear envelope localization domain of approximately 60 amino acids comprising a 20-amino-acid transmembrane region and a 30-35-residue C-terminal region that lies between the inner and the outer nuclear membranes. During meiotic prophase, telomeres cluster to form a bouquet arrangement of chromosomes. SUN and KASH domain proteins form complexes that span both membranes of the nuclear envelope. The KASH domain links the dynein motor complex of the microtubules, through the outer nuclear membrane to the Sad1 domain in the inner nuclear membrane which then interacts with the bouquet proteins Bqt1 and Bqt2 that are complexed with Bqt4, Rap1 and Taz1 and attached to the telomere. SUN domain-containing proteins are essential for recruiting KASH domain proteins at the outer nuclear membrane, and KASH domains provide a generic NE tethering device for functionally distinct proteins whose cytoplasmic domains mediate nuclear positioning, maintain physical connections with other cellular organelles, and possibly even influence chromosome dynamics.
Statistics
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PSSM-Id: 371124
Aligned: 43 rows
Threshold Bit Score: 38.6662
Created: 2-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEN49515      2017 RIGRLCVWLLPLLfLLLLLFFLLSSLFPGGmlgMllgwERGSCHLQNSFRQSWRFMLRH-RSPPPI 2081 Florida lancelet
EEN60484      2647 rLERVLRLALPVQ-ALLFLMLLLVTLLPLM---L----EPECCSTANNLHRSIHPTLRHvNGPSPT 2704 Florida lancelet
16_pfamImport    1 -FWRVVKASVPFY-IFFFFIYFLLWLSSASciiD----DRTICLQRNNLHYSFTPLLTWtDGPPPT 60  
24_pfamImport    1 FLWRVIRAAVPIQ-LAIIVVLCVAYLL-----------GPDCCDSRNNFVFSFSPHLRYvNGPPPV 54  
Q17LM5        1215 WVWRITKIAVPVQ-LALVLVMCAACFF-----------EPHCCDALNTYSMSFTPQLRYiKGPPPV 1268 yellow fever mosquito
EDW04379       405 WAWRIARAAVPMQ-LALFTFFCAACMM-----------QPNCCDNLNNLSMSFTPQLRYiRGPPPI 458  Drosophila grimshawi
EFX72496      1040 W-WRIVRAALPFH-LALIALLLAACVM-----------EPSCCNYLNTFGSSLVPKLSYlGGPPPI 1092 common water flea
XP_008201870  1590 WVWRILRAALPFQ-LALVALFCAACLL-----------EPHCCEASNSLNLSLTPQLRYvRGPPPV 1643 jewel wasp
XP_014354601  1071 WVWRVLRSSLPIQ-LCLVALLLAAWLVE----------RPRCCDALNSLAQTLTPQLRYvRGPPPV 1125 common yellow swallowtail
XP_014693785   419 pgapapaSRRPLT--FLLLLFLFLLLVGAT---VllplSGDPCSSPARLARTPYVVLSYvNGPPPV 479  ass
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