4XLG


Conserved Protein Domain Family
Slx4

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pfam09494: Slx4 (this model, PSSM-Id:370528 is obsolete and has been replaced by 430644)
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Slx4 endonuclease
The Slx4 protein is a heteromeric structure-specific endonuclease found from fungi to mammals. Slx4 with Slx1 acts as a nuclease on branched DNA substrates, particularly simple-Y, 5'-flap, or replication fork structures by cleaving the strand bearing the 5' non-homologous arm at the branch junction and thus generating ligatable nicked products from 5'-flap or replication fork substrates.
Statistics
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PSSM-Id: 370528
Aligned: 88 rows
Threshold Bit Score: 51.3097
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4XLG_B                15 FEFLTHLVKQ---EPDLLTRIYCFQPITMNDLINKLRNK--DsfvDLID----DG----TIREWTDKLGICIRS 75   [Candida] gl...
EER08989             684 klALVHAIRK---DTEMWQRMLLFETIDLTDLSTRLKNQddSi---VCD----TV----LLREMLEEQGVQFCN 743  Perkinsus ma...
CBY11534             970 MNRVTEMIQS---LPFLHKRVIMYDVIGLMELESHCLDAg-----lQVD----EQ----FLIRYCDKTCITFRQ 1027 Oikopleura d...
EFX86110             802 KDHMKEFLKK---RPDIHKLVLTYEPISFEYLFAEIRKDr-----iRCK----AQ----DLLDWLDQECITCRM 859  common water...
EGD77716             206 MRALRRAVRA---DVELYEHVLLYRPIPLARIRACATMAgmR----RWG----ED----KLKRFCNQHGITYTA 264  Salpingoeca ...
CBQ69935             238 AETLTSAIRT---DPAVWARILRYEPISFDEFVSIATANg-----lDMDsgkrKE----ELRGWLDRQCICFYv 299  Sporisorium ...
GAC97693             275 AQTMTSAIQS---NPTLWTRILRYEPISFDEFVSIATQNg-----lEMDsgkrKD----ELRTWLDRQCICFYS 336  Pseudozyma h...
WGS:AACS:CC1G_00420  413 qkALMKKISE---DREIKLKILRYEPISLHVFHTLLIPGr-----tKLSlk-hKT----MLVAFLENEGITTYd 473  Coprinopsis ...
Q6CFP1               733 MSELTEFMMSapeARDMWLKMLTYQPISLSQLMEFNKEHg-----iKIS----KV----LTIAWCDLHGVTWTS 793  Yarrowia lip...
SAM85993             259 AETMTTAIRS---DPSVWSRILRYEPISFDEVVSIATQS--G---LAMD----TGrrkeELRTWLDRQCICFYS 320  Ustilago bro...
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