1YOV


Conserved Protein Domain Family
E2_bind

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pfam08825: E2_bind (this model, PSSM-Id:370142 is obsolete and has been replaced by 462611)
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E2 binding domain
E1 and E2 enzymes play a central role in ubiquitin and ubiquitin-like protein transfer cascades. This is an E2 binding domain that is found on NEDD8 activating E1 enzyme. The domain resembles ubiquitin, and recruits the catalytic core of the E2 enzyme Ubc12 in a similar manner to that in which ubiquitin interacts with ubiquitin binding domains.
Statistics
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PSSM-Id: 370142
Aligned: 145 rows
Threshold Bit Score: 57.5094
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1YOV_B                   357 FSPSAKLQEVLDYLTNSASLQMKSPAITatleGKNRTLYLQSV--TSIEERTRPNLSKTLKELg----LVDGQELAVADV 430 human
Q22T77                   347 ISRSTKLQELQDLLKEKPF-ELTDPSL------TADNGSMLIP--VVMRNQHAEKLPMSFTQLiaeghyQEGLIIHVTDK 417 Tet...
EGR29812                 361 ISKNMLLKDFQKLLQSKPY-EFLDPSL------TGQDGRLIIP--VVMRDLHKEKLEMTFDQLaqqniyKEGEIIYITDQ 431 Ich...
5_pfamImport               2 CKPEATFGSLFATLTA--KYQLKNPTIR----TPNGPIYMISElmPELKAQSEANLEKPLKDV-----MSDGDELFVVDS 70 
Q19360                   349 VSPSSTLESLIIRLSE--RFHLKHPTLA----TSTRKLYCISSfmPQFEQESKENLHTSMKDL-----VSDGEEILVSDE 417 Cae...
1_pfamImport               2 IHPTATFESLVTRVTE--KFHLKNPTLE----TALRKLYCISLlfPQLEEESHRNLHLSIKDV-----LHDGDEVLLSDV 70 
CAP34451                 349 VSSTYTLEELINSLME--RYHLKNPTLE----TAQRKLFCISLlfPQLEEESKANLHLFLKDI-----VADGDEILVSDE 417 Cae...
ESS33614                 493 dPDETSLQDLLELLSQDPALNLKGPGIs----sATAVLFLQKP--PQLRQQLETNLRKSLRELadsgmLKEGEELLVTDV 566 Tox...
WGS:AAFB:cds.EHI_098550A 339 IPTTFTLQQLVDEISDDPELQVSNPSIG----LESGQIIFVSR--GPLKEQTEKNLVLELCQLg----VKEGEELIINSP 408 Ent...
CCX30751                 350 IDPEWTLQDFIDHLAAKPDLQIKKPNLK----RNHAQLYEHDN-----AAEYSTGLDKKMREM-----VAEGEELEVRSE 415 Pyr...
1YOV_B                   431 TTPqtVLFKLHF 442 human
Q22T77                   418 KLFapAKIQIHF 429 Tetrahymena thermophila SB210
EGR29812                 432 KIHsvAKVIVSF 443 Ichthyophthirius multifiliis
5_pfamImport              71 ALTrsISLVIRF 82 
Q19360                   418 ALSraLTLRIQL 429 Caenorhabditis elegans
1_pfamImport              71 ALPraITLRIRF 82 
CAP34451                 418 VLAraITLRINF 429 Caenorhabditis briggsae
ESS33614                 567 ALPstLRLRLFF 578 Toxoplasma gondii VEG
WGS:AAFB:cds.EHI_098550A 409 AISspIFLKIHY 420 Entamoeba histolytica HM-1:IMSS
CCX30751                 416 L-PfvSKFSLVF 426 Pyronema omphalodes CBS 100304
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