6AGB


Conserved Protein Domain Family
POPLD

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pfam08170: POPLD (this model, PSSM-Id:369730 is obsolete and has been replaced by 462391)
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POPLD (NUC188) domain
This domain is found in POP1-like nucleolar proteins.
Statistics
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PSSM-Id: 369730
Aligned: 155 rows
Threshold Bit Score: 81.8396
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6AGB_B                    555 DWIVVLPWFWL-LPLWHLLNRIPrMYHIGLRQFQQIQYENKQLYFPDDYPFT---------------QLGYIENSFYKKE 618  S...
9_pfamImport                1 GWDIVCPPASV-PSLLKTLVFGG-ALVVGLEEDAALSTVLHQPSFPCDYPDT---------------QAGQAHWEARARD 63  
14_pfamImport               1 GWDIVCLPSSV-SSILKTLVFGG-AMVVGLEEDAALHTALHQPSFPCDYPDA---------------QAGQVYWEARARD 63  
WGS:AAFB:cds.EHI_127090A  396 GYFLIVPSLFA-LTCWRRIVWHC-VLPLALKERKYLTYEAGLMTYPDDYVDN---------------EYSQQMSEEQKDI 458  E...
CAX64043                  798 RYFIVCPAKKKcSTLFHLLIRNG-SIAIGLKEREKILKCCNFLTYPKDFPDT---------------SGGISYNKLREDI 861  P...
Q4YXV5                    225 RFFILCPAKKKsSVLFHLLVRNG-SIAIGLKEREKIFKCLDFLCYPKDFPDS---------------VGGIFYNNLREQL 288  P...
CAQ37909                  765 RYLILSPARKKsSVLFQLLVRNG-CIAIGLKEREKILKCSDFLCYPKDFPDS---------------HGGILYNKFREEL 828  P...
Q4UB06                    471 GVDLLIPPNSNsNKLWILLNRFG-GLSIGLTERRHLMNHFHLPSFPHDFPET---------------ELGQLYYKNLFKT 534  T...
EEA07190                  537 GYDLIIPRGINsTILLRFLQSMS-VPIIGIEERRFLSLELEMPYFPFDYIDTlsysktictkyikfdKVNSKYSNFNERI 615  C...
EZG81598                  338 RIKIMMPRDTIgRSVWNLINRYG-AVPLGLDDREKLYSTYDVFHFPSHHIYS---------------PVATALWSKRSAL 401  G...
6AGB_B                    619 AsKTKWDRKPMGKRINFekikdihntklpaysgeigdFFSS--DW 661  Saccharomyces cerevisiae S288C
9_pfamImport               64 L-ATEQAKKPKSKRVNFkkhg-------------vtsPFQP--QW 92  
14_pfamImport              64 L-VIEQAKKPKAKRFGNgkhg-------------vnsPFRP--RW 92  
WGS:AAFB:cds.EHI_127090A  459 L-IKQASLKPKSKKMNIqrfsv-----------qnqiPWEM--NW 489  Entamoeba histolytica HM-1:IMSS
CAX64043                  862 S-TNSYFQKPINKRVNYycig-------------innPFNY--SW 890  Plasmodium falciparum 3D7
Q4YXV5                    289 S-KKKHFKKPINKRVNYyclg-------------innPFNY--SW 317  Plasmodium berghei
CAQ37909                  829 A-RNKYFKKPLRKRINYyclg-------------insPFNY--SW 857  Plasmodium knowlesi strain H
Q4UB06                    535 E-SNKYAMRPANKRVNYsflg-------------vdnAFVLpvNl 565  Theileria annulata
EEA07190                  616 A-LASYLNTPPSKRINFlfnk-------------iryPFIT--DW 644  Cryptosporidium muris RN66
EZG81598                  402 E-RAKWESSPPGRRVNFdklkr-----------rvffPFGL--SW 432  Gregarina niphandrodes
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