Conserved Protein Domain Family
CHDCT2

?
pfam08074: CHDCT2 (this model, PSSM-Id:369684 is obsolete and has been replaced by 462358)
CHDCT2 (NUC038) domain
The CHDCT2 C-terminal domain is found in PHD/RING finger and chromo domain-associated CHD-like helicases.
Statistics
?
PSSM-Id: 369684
Aligned: 16 rows
Threshold Bit Score: 237.246
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q22516       1511 EYEIWHRRHDFWLLAAVAVYGYGR----YQinfqDIMNDPKFSIVNEPFKQTGadpatnfADVKNKFLARRFKLLEQSLV 1586 Caenorhabditi...
EDO39586       24 CDDIWWRKHDYWLLAGVAYHGYAR----WQ----DIANHHMFAVINEPFKNVS-------LEYKNRFIARRFKLLEQALI 88   starlet sea a...
5_pfamImport    1 LNEIWHRKHDYWLIAGIAIHGYAR----WS----DIQNDVRFSIVNEPFRAMHekg--nfLEMQNKFLARRYKLLEQALV 70  
CBY15642     1268 INEIWHRRHDYWLLAGMATHGYAR----WV----DIQNDPKFSIINEPFRAMSqkq-gnfQDMQNRFLGRRFKLLEQALV 1338 Oikopleura di...
8_pfamImport    1 LNEIWHRRHDYWLLAGIVLHGYAR----WQ----DIQNDTQFAIINEPFKTEAnkg--nfLEMKNKFLARRFKLLEQALV 70  
EDV24352       34 nyipWGRVHDYWFLVGVIKHGHGR----WQ----DILADDELSIISDSFIGKSf-----sSEIKNKYMAGRLKILEQALS 100  Trichoplax ad...
EFV57776     1815 lHEIWHRRHDYWLLAGIVVHGYGR----YQ----DIQNDPRFAIINEPFSSEQgkg--nfVDIKNKFLQRRFKLLEQALI 1884 Trichinella s...
EGT46684     1455 HYEVWNRLHDFWLLFGTATHGYSRssvsWQ----DVCNDPRCTIINEAFNRISdvenktyPDIKARFIQQRLKLLEQSLV 1530 Caenorhabditi...
7_pfamImport    1 EYEIWYRRHDYWLLAAVVVHGYGR----FQanfnDVINDPRFSILNEPFKEAGgdn--vnSEIKTKFMQRRFKLLEQALV 74  
1_pfamImport    1 EYEIWHRRHDYWLLAAIVIHGYGR----YQinfqDIISDPRFSIVNEPFKQEVqgsglnfADVKIKFLQRRFKLLEQALV 76  
Q22516       1587 IEEQLRRAAHINK-QQSPDQVGQLAQHFSELEHTADAHVNIARESNNGNRNANAILHKCLAQLDDLLSDLKTDVARLPAT 1665 Caenorhabditi...
EDO39586       89 IEEQLKRADKLNLkQDAQHPAMALNARFAELECLAESHQHLSKESLSGNKPANAVLHKVLNQLEELLADMKGDVNRLPST 168  starlet sea a...
5_pfamImport   71 IEEQLRRASYLGLvQDTKHPAMALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLADMKADVGRLPAT 150 
CBY15642     1339 IEEQLRRASFLNLhQDTKHSAMSLSNHFGQLETLAETHRLLPKIASDGNKAAAHVLLKVLEQMETLLSEMKNDVHRLPGE 1418 Oikopleura di...
8_pfamImport   71 IEEQLRRAAYLNLsQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKGGGGPTTLLLNQLEELLSDMKAEVTRLPAT 150 
EDV24352      101 IEEQLRRADQSTS-ISDEPSYLSLEHGLREIEYMLEAHQHLLAD---DSQTTRDILQRVLGHVDERLCDLKSEASRIISS 176  Trichoplax ad...
EFV57776     1885 IEEQLRRAAYLNLqQDIINPVMALNMRFSEVECLAESHQHLSRESLSGNRPANAVLFKVLNQLEELLNDMKSDVSRLPAT 1964 Trichinella s...
EGT46684     1531 IEEQLRRAAFLNM-QNHPENIGNLAHNYATLEFVADAGAYLSAESRNGDRNANVVLHKALDTISTLLDNMRTDIQHLPTI 1609 Caenorhabditi...
7_pfamImport   75 IEEQLRRAAHINR-HMEPDNVGPLAQRFADLENIAESQANIAKESSAGNRNANAVLHKCLVQLDEILSDMKADVSRLPST 153 
1_pfamImport   77 IEEQLRRAAHIKG-QMQPENVGPMAQHFSDLQSTADSHLNIARESSAGNRNANTILRKCLNQLDELLSDLKGDVVRLPAT 155 
Q22516       1666 ISQVRPVTERLQMSERQILSRL 1687 Caenorhabditis elegans
EDO39586      169 LVRMQTVANRLGMSERSILSQL 190  starlet sea anemone
5_pfamImport  151 LSRIPSVASRLRMSERGILSRL 172 
CBY15642     1419 LSRVQAVSGRLGMSERALLERL 1440 Oikopleura dioica
8_pfamImport  151 LSRIPPIAARLQISERSILSLL 172 
EDV24352      177 LPKQPSISSRLHLSERNLLThf 198  Trichoplax adhaerens
EFV57776     1965 LARLPSVTSRLAMSERSILSRL 1986 Trichinella spiralis
EGT46684     1610 VNKIRPVTDRLQMSEERILSRL 1631 Caenorhabditis brenneri
7_pfamImport  154 FTQLPSVTERLNMTERQILSRL 175 
1_pfamImport  156 LSQMRPVTERLQMTERQILSRL 177 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap