Conserved Protein Domain Family
zf-FCS

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pfam06467: zf-FCS (this model, PSSM-Id:368926 is obsolete and has been replaced by 428958)
MYM-type Zinc finger with FCS sequence motif
MYM-type zinc fingers were identified in MYM family proteins. Human protein ZMYM3 is involved in a chromosomal translocation and may be responsible for X-linked retardation in XQ13.1. ZMYM2 is also involved in disease. In myeloproliferative disorders it is fused to FGF receptor 1; in atypical myeloproliferative disorders it is rearranged. Members of the family generally are involved in development. This Zn-finger domain functions as a transcriptional trans-activator of late vaccinia viral genes, and orthologues are also found in all nucleocytoplasmic large DNA viruses, NCLDV. This domain is also found fused to the C termini of recombinases from certain prokaryotic transposons.
Statistics
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PSSM-Id: 368926
Aligned: 39 rows
Threshold Bit Score: 35.0424
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q65174         56 HSSFKCWTCHLYFKTVPKfvptymRENErgeiemGVLGNFCSFSCAASY 104  African swine fever virus BA71V
Q9CU65        633 DIQLKCNYCKNSFCSKPEi-----LEWE------NKVHQFCSKTCSDDY 670  house mouse
Q14202        586 GIHLSCHYCHSLFSGKPEv-----LDWQ------DQVFQFCCRDCCEDF 623  human
Q98270         49 SERARCWFCSQAVGAAAwa---ieTLHG------HAVGSFCSRICRDSF 88   Molluscum contagiosum virus subtype 1
Q8QNI1         65 SYDKRCHNCAHFFEGVPvp---lpVSRDdlrhvyFCEGKFCSWQCAKSF 110  Ectocarpus siliculosus virus 1
Q98532         29 FVDKLCWHCCHKIPGITlq---ypFSYDdkrdvfKVGGQFCSWECIKGF 74   Paramecium bursaria Chlorella virus 1
A6QPH9        334 LNKSRCTICNKLTEIRHE------VSVN------NVTHKLCSNQCFNKY 370  cattle
Q9UBW7        420 LNKSRCTICGKLTEIRHE------VSFK------NMTHKLCSDHCFNRY 456  human
NP_001171458  449 ADATRCSICQKTGEVLHE------VSNG------SVVHRLCSDSCFSKF 485  house mouse
CAG08242      525 AVQLKCNYCRGAFSLKPEt-----LEWE------DKVYQFCSKVCCEDY 562  spotted green pufferfish
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