Conserved Protein Domain Family
PDE6_gamma

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pfam04868: PDE6_gamma (this model, PSSM-Id:368164 is obsolete and has been replaced by 428163)
Retinal cGMP phosphodiesterase, gamma subunit
Retinal rod and cone cGMP phosphodiesterases function as the effector enzymes in the vertebrate visual transduction cascade. This family represents the inhibitory gamma subunit, which is also expressed outside retinal tissues and has been shown to interact with the G-protein-coupled receptor kinase 2 signalling system to regulate the epidermal growth factor- and thrombin-dependent stimulation of p42/p44 mitogen-activated protein kinase in human embryonic kidney 293 cells.
Statistics
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PSSM-Id: 368164
Aligned: 7 rows
Threshold Bit Score: 109.688
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_018893820   2 SDNTTLAAPASNQGPTTP--RKGPPKFKQRQTRQFKSKPPKKGVKGFGDDIPGMEGLGTDITVICPWEAFSHLELHELAQ 79  western lowland...
Q502C6         5 KPKSTSKGATRATGPGSP--HKGPPKFKQRSTRQFKSKPPKKGVIGFGEEIPGMEGLGTDFNVICPWEAYSHLELHELAQ 82  zebrafish
XP_011619941   1 ----MADTAV-----ATPadKKAPPKFKQRTARTFKSKAPKPGQKGFGDDIPGMEGLGTDITVVCPWEAFGDMELSDLAK 71  torafugu
XP_028441552  27 thadmnaaaaapgGS-----KAAPPKFKQKETRQFKSKAPKAGQKGF-DDVPGMEGLG-DAAVVCPWEAFGDMELCDLAQ 99  yellow perch
XP_007239258   5 PASSALAAPAGGAGPTTP--KKGPPKFKQRQTRTFKSKAPKPGQKGFGDDIPGMEGLGTDFTVVCPWEAFGDMELSDLAK 82  Mexican tetra
XP_022522288  22 PKSDIKSATRVSGGPATP--RKGPPKFKQRQTRQFKSKPPKKGIQGFGDDIPGMEGLGTDITVICPWEAFNHLELHELAQ 99  Mexican tetra
NP_001016745   6 PASSALAPVNNSGGPTTP--RKGPPKFKQRATRQFKSKPPKKGVKGFGDDIPGMEGLGTDITVICPWEAFSHLELHELAQ 83  tropical clawed...
XP_018893820  80 FGII 83  western lowland gorilla
Q502C6        83 YGII 86  zebrafish
XP_011619941  72 YGIV 75  torafugu
XP_028441552 100 FGIV 103 yellow perch
XP_007239258  83 YGII 86  Mexican tetra
XP_022522288 100 YGII 103 Mexican tetra
NP_001016745  84 FGII 87  tropical clawed frog
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