Conserved Protein Domain Family
zf-HIT
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pfam04438: zf-HIT (this model, PSSM-Id:367943 is obsolete and has been replaced by 461310)
HIT zinc finger
This presumed zinc finger contains up to 6 cysteine residues that could coordinate zinc. The domain is named after the HIT protein. This domain is also found in the Thyroid receptor interacting protein 3 (TRIP-3) that specifically interact with the ligand binding domain of the thyroid receptor.
Links
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Statistics
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PSSM-Id: 367943
Aligned: 90 rows
Threshold Bit Score: 36.4689
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_001616794       109 RRKFCIV--CGFEGKYKCLKCYEHkpvsfiryYCSLKCKK 146 malaria parasite P. vivax
EDO41342           304 PKEKCTAqgCSKDKKYNCSTNNLP--------VCSLECYK 335 starlet sea anemone
O22909             445 PRENCVGpsCTNPYKYRDSKTKVP--------LCSLKCYK 476 thale cress
Q0IMM4             334 PREKCAGpsCTNAYRYRDSKLNLP--------LCSLKCYK 365 Japanese rice
Q8GYE3             467 PRERCAGpeCTNPYKYRDSESNLP--------LCSLRCYK 498 thale cress
Q16GX1             294 KPIICGMpnCTNIKRYNCSKTNIP--------LCSYRCYK 325 yellow fever mosquito
FlyBase:CG10395-PD 237 PSQVCFVsgCENRKTYNCSTTNVP--------LCSLTCYR 268 fruit fly
EDW31273           131 PAQFCCIsdCKNRKAYSCSKTNVP--------LCSLVCYR 162 Drosophila persimilis
CAF90536           291 tRVSCGVggCTNLKKYSCSKTGVP--------LCSLDCYK 322 spotted green pufferfish
NP_001070726       302 aplSCGVagCANLKKYCCSKTGTP--------LCSLECYR 333 zebrafish
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