5Y88


Conserved Protein Domain Family
G-patch
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pfam01585: G-patch (this model, PSSM-Id:366717 is obsolete and has been replaced by 396249)
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G-patch domain
This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines.
Links
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Statistics
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PSSM-Id: 366717
Aligned: 46 rows
Threshold Bit Score: 37.0938
Created: 24-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5Y88_U   61 TYGIGAKLLSSMGYVAGKGLG-----KDGSGITTPIETQSRPMhNAGLG 104  Saccharomyces cerevisiae S288C
Q9VPY4  935 SSNVGSRLLQKMGWSEGQGLG-----RKNQGRTQIIEADGRSN-YVGLG 977  fruit fly
Q06152   41 IMPRGYKMMENMGYKEGETLG-----SNESALKEPIKVEINTK-RRGIR 83   Saccharomyces cerevisiae S288C
Q22705   26 DQKLSKKLMEKMGWSEGDGLG-----RNRQGNADSVKLKANTS-GRGLG 68   Caenorhabditis elegans
Q17784  153 NSNKIMKMMQAMGYKPGEGLG-----AQGQGIVEPVQAQLRKG-RGAVG 195  Caenorhabditis elegans
P63127  111 YSPTSQKIMTKRGYIPGKGLG-----KNEDGIKIPFEAKINQK-REGIG 153  human
Q9TTD4  244 pSPTVTDLMLDQGLLPNQGLG-----KQHQGIILPLDLKSNQD-RKGLG 286  sheep
P78332 1051 TSSKGGCVQQATGWRKGTGLG-----YGHPGLASSEEAEGRMR-GPSVG 1093 human
P98175  858 SDNIGSRMLQAMGWKEGSGLG-----RKKQGIVTPIEAQTRVR-GSGLG 900  human
Q21827  145 SNSIGVRMLRSMGWREGRGIGlanvkQKQKRGGESSEAQFDRE-QASKV 192  Caenorhabditis elegans
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