1GR3,1O91,2JG8,4F3J,4OUS,5YBZ


Conserved Protein Domain Family
C1q

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pfam00386: C1q (this model, PSSM-Id:366066 is obsolete and has been replaced by 395310)
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C1q domain
C1q is a subunit of the C1 enzyme complex that activates the serum complement system.
Statistics
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PSSM-Id: 366066
Aligned: 38 rows
Threshold Bit Score: 103.913
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GR3_A        33 AFTVILS--KAYPai-----gtPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVH--VKGT-HVWVGLYKNGTPVM 102 human
Q5RJ80       786 AFSAARTanFAPGtl-----dqPIAFDLLHTNLGDMFDTGSGRFTCPATGAYVFIFHILklAISV-PLYINLMRNEEVMV 859 zebrafish
Q9ES30       119 AFMASLAthFSNQn-------sGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMkhEDVE-EVYVYLMHNGNTVF 190 house mouse
Q9QXP7       147 AFSVGRKkaLHSNdy-----fqPVVFDTEFVNLYKHFNMFTGKFYCYVPGIYFFSLNVHt-WNQK-ETYLHIMKNEEEVV 219 house mouse
P60827       118 AFSVGRRegLHSSdh-----fqAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHt-WNYK-ETYLHIMLNRRPAA 190 human
Q9BXI9       145 AFSVGRKtaLHSGed-----fqTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHs-WNYK-ETYVHIMHNQKEAV 217 human
Q8R066        30 AFSAARTtpLEGTse------mAVTFDKVYVNIGGDFDAATGRFRCRVPGAYFFSFTAGk-APHK-SLSVMLVRNRDEVQ 101 house mouse
Q8R066       176 AFSAARTrsLVGSdaapgprhrPLAFDTELVNIGGDFDAAAGVFRCRLPGAYFFSFTLGk-LPRK-TLSVKLMKNRDEVQ 253 house mouse
4OUS_A         7 AFSAARTanFAPGtl-----dqPIAFDLLHTNLGDMFDTGSGRFTCPATGAYVFIFHILk-LAISvPLYINLMRNEEVMV 80  zebrafish
XP_021323416  61 AFSASLLssHNIKyigpyaedtMIVYGKIFTNIGNAYNTTTGIFSAPVKGVYFFNLVLFt-HDAL-SAGVKLLKNDDHVV 138 zebrafish
1GR3_A       103 YTYDEYTKGY--LDQASGSAIIDLTENDQVWLQLPna-esNGLYSSEY-VHSSFSGFLV 157 human
Q5RJ80       860 SAYANDGAPD--HETASNHAVLQLFQGDQVWLRLH-----RGAIYGSSwKYSTFSGFLL 911 zebrafish
Q9ES30       191 SMYSYETKGK--SDTSSNHAVLKLAKGDEVWLRMG-----NGALHGDHqRFSTFAGFLL 242 house mouse
Q9QXP7       220 ILYAQVSDRS---IMQSQSLMMELREEDEVWVRLFkgereNAIFSDEFdTYITFSGYLV 275 house mouse
P60827       191 VLYAQPSERS---VMQAQSLMLLLAAGDAVWVRMFqrdrdNAIYGEHGdLYITFSGHLV 246 human
Q9BXI9       218 ILYAQPSERS---IMQSQSVMLDLAYGDRVWVRLFkrqreNAIYSNDFdTYITFSGHLI 273 human
Q8R066       102 ALAFDEQRRPgaRRAASQSAMLQLDYGDTVWLRLH-----GAPQYALGaPGATFSGYLV 155 house mouse
Q8R066       254 AMIYDDGASRr-REMQSQSVMLPLRRGDAVWLLSHdhdgyGA--YSNHgKYITFSGFLV 309 house mouse
4OUS_A        81 SAYANDGAPD--HETASNHAVLQLFQGDQVWLRLH-----RGAIYGSSwKYSTFSGFLL 132 zebrafish
XP_021323416 139 GVTDNPPTEDk-EDTASNSVSLLLEEGDQISVKLIa---hRRIYTDGF-RRNTFSGHLL 192 zebrafish
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