Conserved Protein Domain Family
Calc_CGRP_IAPP

?
pfam00214: Calc_CGRP_IAPP (this model, PSSM-Id:365950 is obsolete and has been replaced by 459715)
Calcitonin / CGRP / IAPP family
Statistics
?
PSSM-Id: 365950
Aligned: 66 rows
Threshold Bit Score: 55.4085
Created: 19-Apr-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q75V94          1 MGFWkFSPFLVlgiLALYQVGFLQAAPFRSALEnppdsgvRNEEELRLL----------LAAVMKDYMQ----------- 59  dog
Q75XW8          1 MKLIfQSFLYCc--LLATVA---HCVEFDAKPQ-------LKKRLNILL----------RNRLRRDLA------------ 46  torafugu
20_pfamImport   1 MQLIfQLFLSCc--LLATVA---HCVELQVNPE-------LKKRLSMWL----------GSRFERDLD------------ 46 
XP_008403494    1 MKTIfHSFLYCc--LLASVA---HCVELEVNPE-------LKKRLSIWL----------GSRLRRDLE------------ 46  guppy
XP_006642558    1 MKLIlQIAFFCw-cLLASGVFSVESAKLNLTSQ-------LKKRVSIWA----------LNRMKRDLKSssvsklseads 62  spotted gar
NP_001313638    1 MQLIlQSIFCCc--LLAAVAPGVDSAKHDL-------------KRSVWL-----------QRSKRDLSL----------- 43  zebrafish
CAF99639       33 MKLIvQSFLYCc--LLATVARC---GEFDVKPQ-------LRKRPSIWFrnrlrrdldrVSVERTEELQ----------- 89  spotted green ...
NP_001098359    1 MARIfHSVLFCc--LLATLA---HCMELDVNPE-------LKKRLSIWL----------ESRMIRDLDS----------- 47  Japanese medaka
XP_007234281    1 MNLIiLSLFCCc--LLITITPSVNSAKFNLSQVl---------KRSVWL-----------QRTKRDLSS----------- 47  Mexican tetra
XP_003455427    1 MRLFlHTIICCc--VFTTVLPLVKGARGETNTS-------LRKRSRVWL----------QSHMKRDLRS----------- 50  Nile tilapia
Q75V94         60 --MKTHELEQe------------------------QET-E-----------------GSRVA--VQ--K----------- 80  dog
Q75XW8         47 ------RVSVg------------------------KTE-ElqhfvrpedirdtllphSSTDI--NI--Rtkrsknlvnqs 91  torafugu
20_pfamImport  47 ------SVSVe------------------------KTA-EseyfvrpddirdtrlplSSTDI--HV--Rtkrsk----ns 87 
XP_008403494   47 ----TVAVQKt------------------------AES-Enfvrpedi--rdillphSSTDIkiRT--K----------- 82  guppy
XP_006642558   63 fhMQFVSQDDv------------------------KDTlSp---------------hSSPDT--NI--Rvkrymnsvsqs 99  spotted gar
NP_001313638   44 --PALRALENr------------------------QFV-Rpddvkd------nlrphSSTDI--SI--Rakrsknsinqs 86  zebrafish
CAF99639       90 --HFVSPDEVr------------------------VTR-Lp---------------hSSTDF--NV--Rtkrsknsgnqt 123 spotted green ...
NP_001098359   48 --TTAe-----------------------------KTA-EtqhfvtpedirdtflphSSSGS--IV--Rtkrskisnsqs 91  Japanese medaka
XP_007234281   48 --LSALRETQsgpqfvrpedvkdsllphssashtgMRT-Kr---------------sKSSVI--NQskR----------- 96  Mexican tetra
XP_003455427   51 --RLVTGDDQyfsgpq--------------qdrlaKTL-Pt---------------pSSFGL--NI--R----------- 83  Nile tilapia
Q75V94         81 --R--------SCNSATCVAHWLGGLLSRA-GSVANTNLLPTS-MGFKVYNRRRR 123 dog
Q75XW8         92 rkN--------GCSLGTCTVHDLAFRLHQL-GFQYKIDIAPVDkISPQGYGRRRR 137 torafugu
20_pfamImport  88 vrH--------GCSLGTCIVHDLAHSLHQL-NNKRKIGSAPASkMSAQGYGRRRR 133
XP_008403494   83 --Rs------aGCALGTCSVHVLAHRVQQF-KDNKLKTSVPINkMSPHGYGRRRR 128 guppy
XP_006642558  100 krT--------GCSLSTCSVNDLAHRLYQI-GDKQRVHSAPLHkISPTGYGRRRR 145 spotted gar
NP_001313638   87 rrS--------GCSLGTCTVHVLAHRLHDL-NNKLKIGNAPVDkINPYGYGRRRR 132 zebrafish
CAF99639      124 rrQ--------GCSLGTCIVHDLAHRLHQL-GNKYKFGNAPEDkMSPQGYGRRRR 169 spotted green pufferfish
NP_001098359   92 rrQ--------GCSLGTCTVHDLAHRLHEL---NLRIGSAPADkISPKGYGrrrr 135 Japanese medaka
XP_007234281   97 --S--------GCALGTCTMHDLAHRLQQL-NNKLK--VAPIEkIGALGYGrrrr 138 Mexican tetra
XP_003455427   84 --SrrstssqsGCFLITCIYHDLFHRLVQIkKNEQTDTTAPTSkigrngygrrrr 136 Nile tilapia
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap