1YGR


Conserved Protein Domain Family
R-PTPc-C-1

?
cd14557: R-PTPc-C-1 
catalytic domain of receptor-type tyrosine-protein phosphatase C, repeat 1
Receptor-type tyrosine-protein phosphatase C (PTPRC), also known as CD45, leukocyte common antigen (LCA) or GP180, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRC/CD45 is found in all nucleated hematopoietic cells and is an essential regulator of T- and B-cell antigen receptor signaling. It controls immune response, both positively and negatively, by dephosphorylating a number of signaling molecules such as the Src family kinases, the CD3zeta chain of TCY, and ZAP-70 kinase. Mutations in the human PTPRC/CD45 gene are associated with severe combined immunodeficiency (SCID) and multiple sclerosis. PTPRC/CD45 contains an extracellular receptor-like region with fibronectin type III (FN3) repeats, a short transmembrane segment, and a cytoplasmic region comprising of a membrane proximal catalytically active PTP domain (repeat 1 or D1) and a membrane distal catalytically impaired PTP-like domain (repeat 2, or D2). This model represents repeat 1.
Statistics
?
PSSM-Id: 350405
Aligned: 7 rows
Threshold Bit Score: 402.668
Created: 29-Sep-2010
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
catalytic siteactive site
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 2 residue positions
Conserved feature residue pattern:C RClick to see conserved feature residue pattern help
Evidence:
  • Comment:the catalytic cysteine initiates a nucleophilic attack on the phosphate group of the substrate, forming a transient phosphoenzyme intermediate and releasing the substrate dephosphorylated; the transition state is stabilized by the arginine present in the catalytic pocket

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1YGR_A         84 YINASYIDGfkeprKYIAAQGPrdetvdDFWRXIWEQkaTVIVXVTRCeegnrNKCAEYWPsxeegtrafgdVVVKINQH 163  human
Q9IBD8        614 YINASFIEGyrepkKYIAAQGPkdetvvDFWRMVWEQksSIIVMVTRCeegnkTKCAQYWPsldreaeifeeFVVKIRSE 693  common carp
AAY57452      456 YINASYVDGykssiRYIAAQGPlentagDFWQMIWEKksSVIVMVTKCeemgkVKCFQYWPhpdedkraygdVTVTIMDE 535  sea lamprey
NP_989748     640 YINASYIDGfkeprKYIAAQGPkdettdDFWRMIWEQkaTIIVMVTRCeegnrNKCAQYGPsmengsatygdITVKINES 719  chicken
XP_002932222  527 YINASYVNGfkeprKYIAAQGPkdetvyDFWRMVWEQksTIIVMVTRCeegnrNKCAQYWPsledesatyneIVLKITEE 606  western clawe...
P08575        705 YINASYIDGfkeprKYIAAQGPrdetvdDFWRMIWEQkaTVIVMVTRCeegnrNKCAEYWPsmeegtrafgdVVVKINQH 784  human
XP_014347810  528 YINASYIDGfkeprKYIAAQGPkdettdDFWRMVWEQktTVIVMVTRCeegnrNKCAQYWPtmekgqevfgdITVHISEE 607  coelacanth
Feature 1                                                                            #     #      
1YGR_A        164 KRCpdYIIQKLNIVnkke-katgREVTHIQFTSWPDHGVPedPHLLLKLRRRVNAFSNFfsgPIVVHSSAGVGRTGTYIG 242  human
Q9IBD8        694 EHCpdYVIRHLILNnkre-kgseREVTHIQFISWPDHGVPgdPSLLLKLRRRVNSFKNFfsgPVVVHCSAGVGRTGTYMS 772  common carp
AAY57452      536 KPYadIVIRTLSIShskhrgfgaHWVTHVQLVSWPDHGVPedPNLLLKLRRRVNSFNGAgctAVVVHCSAGVGRSGTYIG 615  sea lamprey
NP_989748     720 KICpdYIIQKLHITngre-rtsgRDVTHIQFTSWPDHGVPedPHLLLKLRRRVNALSNFfsgPIVVHCSAGVGRTGTYIG 798  chicken
XP_002932222  607 KIFpdYITRKLHINneke--rseRDVTHIQFTVWPDHGVPddPNLLLKLRRRVNALNNFfsgPIIVHCSAGVGRTGTYVS 684  western clawe...
P08575        785 KRCpdYIIQKLNIVnkke-katgREVTHIQFTSWPDHGVPedPHLLLKLRRRVNAFSNFfsgPIVVHCSAGVGRTGTYIG 863  human
XP_014347810  608 KICpdYIIRKINIThske-kgsaRDVTHIQFMSWPDHGVPddAHLLLKLRRRVNAFNNLfsgPIIVHCSAGVGRTGTYIG 686  coelacanth
Feature 1                                                   
1YGR_A        243 IDAXLEGLeaENKVDVYGYVVKLRRQRCLXVQVEAQYILIHQ 284  human
Q9IBD8        773 IDAMIESLeaEGRVDIYGFVAKLRRQRCLMVQVEAQYILIHT 814  common carp
AAY57452      616 LDCLVRQLenEGHVDVYGCVFRLRHQRPLMVQVESQYVLLHR 657  sea lamprey
NP_989748     799 IDAMLEGLdaEGRVDVYGYVVKLRRQRCLMVQVESQYILIHQ 840  chicken
XP_002932222  685 IDAMLEGLeaEGRVDVYGYVVQLRRQRCLMVQVESQYIFIHK 726  western clawed frog
P08575        864 IDAMLEGLeaENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQ 905  human
XP_014347810  687 IDAMMEGLeaEGVVDVYGYIVKLRRQRCLMVQVEAQYILIHQ 728  coelacanth

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap