3HVE,2PPI


Conserved Protein Domain Family
BTB_POZ_KLHL16_gigaxonin

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cd18245: BTB_POZ_KLHL16_gigaxonin 
Click on image for an interactive view with Cn3D
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in gigaxonin
Gigaxonin, also called Kelch-like protein 16 (KLHL16), may be a cytoskeletal component that directly or indirectly plays an important role in neurofilament architecture. It may also act as a substrate-specific adaptor of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, including tubulin folding cofactor B (TBCB), microtubule-associated protein MAP1B, and glial fibrillary acidic protein (GFAP). Gigaxonin is mutated in giant axonal neuropathy. It contains a BTB domain and kelch repeats, characteristics of a kelch family protein. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.
Statistics
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PSSM-Id: 349554
Aligned: 13 rows
Threshold Bit Score: 164.82
Created: 11-Sep-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ## ##  #      #              # ## ###       #                                   
3HVE_B         18 LLRALSSFRee-srFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYnppkd----------dgstYKIELEGIsVXVXR 86   human
2PPI_A         34 LLRALSSFRee-srFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYnppkd----------dgstYKIELEGIsVMVMR 102  human
XP_013389661   24 LLKALNDGRwn-phLCDGTVVIKGRKIAVQKNVLAAASPYFRAVYSYqq---------------lgTAVDINEMdPEIFE 87   Lingula anatina
XP_013090261   23 LLKSLNESRdr-pnLCDAVVIIGSSQIPVQKNILSAASHYFRALFDYddhitnnakekqgvssgstVSLDHMGIdENTFK 101  Biomphalaria ...
XP_002612467    7 LLANMNELRar-phMCDVTLMVGGKEFYLQKIVLSAASTYFRALFDYskgqgq--------vgdkpLQIEAESLtASVFE 77   Florida lancelet
ELU05864       29 LLQSLNETRnn-pqLCDGVVVIGKEEIPVQKNVLAAASPYFRALYDYslpmsst------edpsnrAALNEDVVtSATFH 101  Capitella teleta
NP_001087581   22 LLRALGSFRge-sgFCDALLLLEGQEIPIQRNILAAASPYIRAKLNYnppkn----------dgsiYRIELEGIsVDVMK 90   African clawe...
XP_003200482   24 LLRVLQSFRqd-dcFQDAVLVLEGEQIPVQKNILAAASPYIRTKLNYnppke----------dgsvYTIELQGIaVTTMR 92   zebrafish
XP_006008116   20 LLRALGSFGretqlFCDAMLQVEGKEIPVQKNVLAAASPYVRTKLNYdppkn----------dgslYMIELEGIsFTVMN 89   coelacanth
XP_428110      16 LLRALSSFRee-srFCDAHLVLEGEEIPVQKNILAAASPYIRTKLNYnppkd----------dgstYKIELEGIsVDIMK 84   chicken
XP_007887458   25 LLLSLRSFRld-plYCDAVLVVGGEEIPVQKNLLAAVSPYVRTKLNYtpptd----------dgsvYKIVLDGIsFAVMQ 93   elephant shark
Q9H2C0         16 LLRALSSFRee-srFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYnppkd----------dgstYKIELEGIsVMVMR 84   human
KXJ17558       28 LMQCLNDFRkh-nvLCEVTIVVNGKPFYAHRNVLAAASPYFRAMFSNhfre-----------qtdaKPVILENItAEVME 95   Exaiptasia pa...
Feature 1             ##  ##                     #          
3HVE_B         87 EILDYIFSGQIRLnEDTIQDVVQAADLLLLTDLKTLCCEFLE 128  human
2PPI_A        103 EILDYIFSGQIRLnEDTIQDVVQAADLLLLTDLKTLCCEFLE 144  human
XP_013389661   88 QILDYIYTSVIMMdEENIQDILQAADILLMADLKDLCCDYLE 129  Lingula anatina
XP_013090261  102 SILDFIYTAEVKLnPHNIQDMLQAADQLLMSDLKDICCEFLD 143  Biomphalaria glabrata
XP_002612467   78 QIVEYIYTGKIDIsEDNVQDILQAADILLMTDLKDLCCEFLE 119  Florida lancelet
ELU05864      102 EILEYIYTSNISLgEENIQDTLQAADHLLMIDLKELCCEYLE 143  Capitella teleta
NP_001087581   91 EILDYIFSGQIRLsEETIQDVVQAADLLLLTDLKTLCCEFLE 132  African clawed frog
XP_003200482   93 QILDYIFSGEITLsEDTIQDVVQAADLLLLTDLKSLCCQFLE 134  zebrafish
XP_006008116   90 EILDYLFSGTIKLsEDTIQGIVQAADLLLLTDLKVLCCEFLE 131  coelacanth
XP_428110      85 EILDYIFSGQIRLnEETIQDVVQAADLLLLTDLKTLCCEFLE 126  chicken
XP_007887458   94 ELLDYMFTGQIKLsEDTIQDIVQAADLLLLTDLKALCCEFLE 135  elephant shark
Q9H2C0         85 EILDYIFSGQIRLnEDTIQDVVQAADLLLLTDLKTLCCEFLE 126  human
KXJ17558       96 ELLNFIYTGTIKItPFNVKDLVSASNYLLMTSLKDACVSFMK 137  Exaiptasia pallida

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