4L6R,4K5Y,5UZ7


Conserved Protein Domain Family
7tmB1_hormone_R

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cd15041: 7tmB1_hormone_R 
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The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors
The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.
Statistics
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PSSM-Id: 341321
Aligned: 31 rows
Threshold Bit Score: 259.079
Created: 11-Nov-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:putative polypeptide ligand binding pocket [polypeptide binding site]
Evidence:
  • Comment:based on mutagenesis of human glucagon receptor (GCGR), and modeling studies of GCGR and other related class B GPCRs
  • Comment:Residues in the globular N-terminal extracellular domain and the extracellular loops of the 7TM domain may also be involved in ligand binding.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #   #                                         #  ##  #                   
4L6R_A    122 YSSFQVMYTVGYSLSLGALLLALAILGGLSKlhctrNAIHANLFASFVLKASSVLVIDGLLrtrysqkigddls------ 195
4K5Y_A     14 YHVAAIINYLGHCISLVALLVAFVLFLRARSirclrNIIHANLIAAFILRNATWFVVQLTMspevhq------------- 80 
NP_510496 112 RDLVISVSLTLSFVSVILLVAAIVLFSIFDSiqcrrLSIHKNLATAFVFRFAVLAIWTIVQttnvfqdctrl-------- 183 nematode
Q16983    130 DAAMAFVFFVGFCLSLVAIAVAIWIFLYFKDlrclrNTIHTNLMATYICNDATWIISAVVQeyve--------------- 194 house cricket
Q09460    164 ARNARKLEFVGLGLSLVSLILAISIFSYFRRlrvfrNLLHLHLMIAMLMVVILRLVLYIDLiftgengphtns------- 236 Caenorhabditis ele...
EEC03401   91 SLAVSYILLLFSLLSLIFLFATMFIFCYFRSlqcsrTRVHQNLVLALMVHAVMLVVLSLPVvlhsdaps----------- 159 black-legged tick
ELU13014   74 GQSARDIYFFGSIISAVLLTITLFIFSYFRTlqcnrISIHKNLVLSFIVRCTILVIYLEPLvtnrkss------------ 141 Capitella sp. I Gr...
Q7ZXS8    153 ALNLYYLTIIGHGLSIASLLISLGIFFYFKNlscqrITLHKNLFFSFVCNSIITIISLSAVannqalv------------ 220 African clawed frog
EEN54553   81 LLAVRDIYFAGSALSLLMLCISMFIFSYFRRlhcdrIRIHKQLLLSLIFRSIILIILMQPGddsgpps------------ 148 Florida lancelet
CBY43789  186 LRMAKMIMVSGYAVSLIATTLGSILMLMLRRlrctrIYIHINLLISFMMRAMLWLFHGSVYgsaddslshspalqpdpvv 265 Oikopleura dioica
Feature 1                                                                     #      #        
4L6R_A    196 ---------------------------------------------------vstwlsdgavagCRVAAVFMQYGIVANYC 224
4K5Y_A     81 ----------------------------------------------------------snvgwCRLVTAAYNYFHVTNFF 102
NP_510496 184 ----------------------------------------------------tplplwdyewiCKAILWFVIYFNVASVM 211 nematode
Q16983    195 -----------------------------------------------------------ngglCSVLAVLMHYFYLTNFF 215 house cricket
Q09460    237 ---------------------------------------------------aegktintmpivCEGMFFFLEYFKTVTFC 265 Caenorhabditis ele...
EEC03401  160 -------------------------------------------------------pfvqipplCKSILSLKMYAAMASIN 184 black-legged tick
ELU13014  142 --------------------------------------------------------yrdkpwlCKLLTCLHQYSLIANIF 165 Capitella sp. I Gr...
Q7ZXS8    221 ---------------------------------------------------------atnpviCKISQFIHLYLMGCNYF 243 African clawed frog
EEN54553  149 --------------------------------------------------------ymnepvvCRGLVVLSQYFSMSNIF 172 Florida lancelet
CBY43789  266 mqyfqdnnlsnstdpkeihkiafehlvrdllnkkssiddyptlkdahstfcvardpeissafvCRTYETLMMYFQLCNYF 345 Oikopleura dioica
Feature 1                                                                                     
4L6R_A    225 WLLVEGLYLHNLLGlatl-------------------------------------------------------------- 242
4K5Y_A    103 WMFGEGCYLHTAIVltnifemlrideglrlkiykdtegyytigighlltkspslsvakseldkaigrnsngvitkdeaek 182
NP_510496 212 WMLIEGAFLYSRFTvfam-------------------------------------------------------------- 229 nematode
Q16983    216 WMFVEGLYLFLLVVatft-------------------------------------------------------------- 233 house cricket
Q09460    266 WMFLEGIYLNNQIVfgff-------------------------------------------------------------- 283 Caenorhabditis ele...
EEC03401  185 WMFVEGLLLHSRITicif-------------------------------------------------------------- 202 black-legged tick
ELU13014  166 WMFVEGLFLHNRVAvsvf-------------------------------------------------------------- 183 Capitella sp. I Gr...
Q7ZXS8    244 WMLCEGIYLHTLIVvavf-------------------------------------------------------------- 261 African clawed frog
EEN54553  173 WMLVEGLFLYMRCVvavf-------------------------------------------------------------- 190 Florida lancelet
CBY43789  346 WFLVEGFYLKMLLQrssv-------------------------------------------------------------- 363 Oikopleura dioica
Feature 1                                                                                     
4L6R_A        --------------------------------------------------------------------------------    
4K5Y_A    183 lfnqdvdaavrgilrnaklkpvydsldavrrsalinmvfqmgetgvagftnslrmlqqkrwdeaavnlaksrwynqtpnr 262
NP_510496     --------------------------------------------------------------------------------     nematode
Q16983        --------------------------------------------------------------------------------     house cricket
Q09460        --------------------------------------------------------------------------------     Caenorhabditis ele...
EEC03401      --------------------------------------------------------------------------------     black-legged tick
ELU13014      --------------------------------------------------------------------------------     Capitella sp. I Gr...
Q7ZXS8        --------------------------------------------------------------------------------     African clawed frog
EEN54553      --------------------------------------------------------------------------------     Florida lancelet
CBY43789      --------------------------------------------------------------------------------     Oikopleura dioica
Feature 1                                                                                     
4L6R_A    243 ---------------perSFFSLYLGIGWGAPMLFVVPWAVVKclfe---------------nvqCWTsn-------dNM 285
4K5Y_A    263 akrviatfrtgtwdaydrLRAWMFICIGWGVPFPIIVAWAIGKlyyd---------------nekCWAgk------rpGV 321
NP_510496 230 --------------rhsdAPWSLYLACGWGVPFVVVTAWALVHqyissq-----------qtnsfCWLpy-------aQG 277 nematode
Q16983    234 ---------------gekVKLQIYIIIGWGIPGVIVVTWAIIKhlgktapdnageshpmvllikhCPWm--------aED 290 house cricket
Q09460    284 ---------------nsePKLLPYFIAGYGIPLVHTMLWLLVVlikkd------------fkverCLGsy-------yLE 329 Caenorhabditis ele...
EEC03401  203 ---------------rqdAPFKLYHAIGWGLPLTFILSWAYLMeqtl---------------rtpCWEgy-------gSN 245 black-legged tick
ELU13014  184 ---------------nseAPFRVFYAVGWGLPALIVLAWAVCLhlyh---------------ddpCWNns-------fNL 226 Capitella sp. I Gr...
Q7ZXS8    262 ---------------aekQHLMWYYLLGWGFPLIPACIHAVARslyy---------------ndnCWIs--------sET 303 African clawed frog
EEN54553  191 ---------------hylSSLAVFYVIGWGMPAVFVAAWTVVMylfd---------------terCWMdy-------tRL 233 Florida lancelet
CBY43789  364 ---------------rsmSNMKYYLLFGWALPLVPILIWIIVSlitr--------------sdkpCWIddengrvtekDY 414 Oikopleura dioica
Feature 1      ## # #                                                      #  #               
4L6R_A    286 GFWWILRFPVFLAILINFFIFVRIVQLLVAKLRarqm-hhtdYKFRLAKSTLTLIPLLGVHEVVFAFVTDehaq--gtlR 362
4K5Y_A    322 YTDYIYQGPMALVLLINFIFLFNIVRILMTKLRastt-setiQARKAVKATLVLLPLLGITYMLAFVNPGede----vsR 396
NP_510496 278 LHLWILAGTMGSALIMNLIFLLMIVVILVQKLRtens-aeskKIWRTIKATLLLVPLLGISNIPLFYEPEh-------pS 349 nematode
Q16983    291 YFDWIHQAPVITVLAVNLVFLFSIMWVLITKLQsant-aetqQYRKATKALLVLFPLLGITYILMMQGPMdg-----vaG 364 house cricket
Q09460    330 PEFWILDGPRMAELVINLFFICNVIRVLYSKVResnn-tseaGLKKSVKAAMMLLPLLGVPNIMQTIPFAptrd-nimvF 407 Caenorhabditis ele...
EEC03401  246 SYVWLLIGPRLVALLVNFVFLVNIIRILVTRVKsavs-lettQFRKAIKATVLLFPLLGITHLLFCINPQded---mglK 321 black-legged tick
ELU13014  227 PYTWIIIVPIMIALMVNLIFLCNIIRILITKLRannt-veicLNRKAVKALAVLFPLLGTSNLLFFLKPQge-----tsV 300 Capitella sp. I Gr...
Q7ZXS8    304 HLLYIIHGPICAALLVNLFFLLNIVRVLITKLKvthq-aesnLYMKAVRATLILVPLLGIEFVLFPWKPEgr-----iaE 377 African clawed frog
EEN54553  234 SYAWIVSGPIVVVLVVNLYFLLHILVVLITKMKadqhstqftEPWKALKAMFILLPLLGLTNLLFFVDPQdgg----lgE 309 Florida lancelet
CBY43789  415 TNMLILEIPIMVTVLINVFIFVSVVTIVGSKLRatlr--ksdFRYRLLRANLALIPLLGIHYSLTMFVKYlatedkttlH 492 Oikopleura dioica
Feature 1        #   #                               
4L6R_A    363 SAKLFFDLFLSSFQGLLVAVLYCFLNkEVQSELRRRWHR 401
4K5Y_A    397 VVFIYFNAFLESFQGFFVSVFACFLNsEVRSAAAAHHHH 435
NP_510496 350 SVYMLGSAILQHSQGIFIAVLYCFLNsEIQGALKRQLSK 388 nematode
Q16983    365 HVFRNAQALLLSLQGFTVALFYCFLNtEVQNTLRHRMSR 403 house cricket
Q09460    408 AVWTYTASFTYMYQGLMVASIYCFTNkEVNHVLKTFYAR 446 Caenorhabditis elegans
EEC03401  322 EAYMIINAILQSSQGIFVSVLYCFMNsEVQTALRNAYLR 360 black-legged tick
ELU13014  301 IVYRITNAILQSSQGIFVSVIYCFMNgEVSNLLVPMATV 339 Capitella sp. I Grassle & Grassle, 1976
Q7ZXS8    378 EIYDYVMHILMHYQGLLVATIFCFFNgEVQAVLKRHWNQ 416 African clawed frog
EEN54553  310 DIYQVFNAVMQATQGMFVSTIYCFTNaEVQNVIRDKLGH 348 Florida lancelet
CBY43789  493 TVCNYINTIMSSLQGLFVAIIYCFCNaEVQDELEKSYAA 531 Oikopleura dioica

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