1YVL,1BF5


Conserved Protein Domain Family
STAT1_CCD

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cd16851: STAT1_CCD 
Click on image for an interactive view with Cn3D
Coiled-coil domain of Signal Transducer and Activator of Transcription 1 (STAT1)
This family consists of the coiled-coil (alpha) domain of the STAT1 proteins (Signal Transducer and Activator of Transcription 1, or Signal Transduction And Transcription 1). STAT1 plays an essential role in mediating responses to all types of interferons (IFN), transducing signals from cytoplasmic domains of transmembrane receptors into the nucleus where it regulates gene expression. Thus STAT1 is involved in modulating diverse cellular processes, such as antimicrobial activities, cell proliferation and cell death. STAT1 function is crucial in the innate and adaptive arm of immunity and protects from pathogen infections; phosphorylation of a critical tyrosine by Janus kinases (JAKs) leads to its activation and nuclear translocation, while phosphorylation of a critical serine is required for full transcriptional activation upon IFN stimulation and in response to cellular stress. Transcription of protein-encoding genes (including Stat1 itself) as well as expression of microRNAs (miRNAs) is regulated by activated STAT1. Animal studies have shown that STAT1 is generally considered a tumor suppressor but it can also act as a tumor promoter; its functions are not restricted to tumor cells, but extend to parts of the tumor microenvironment such as immune cells, endothelial cells. STAT1 abundance is a reliable marker for good prognosis in selected tumor types, but it can also correlate with disease progression. In head and neck cancer (HNC) patients, upregulation of STAT1-induced HLA class I enhances immunogenicity and clinical response to anti-EGFR mAb cetuximab therapy. In systemic juvenile idiopathic arthritis (sJIA) characterized by systemic inflammation and arthritis, STAT1 phosphorylation downstream of IFNs is impaired. It exerts anti-oncogenic activities through interferon-gamma and interferon-alpha. STAT1 may inhibit hepatocellular carcinoma cell growth by regulating p53-related cell cycling and apoptosis. Studies also show a significant correlation of high STAT1 activity with longer colorectal cancer patient overall survival. Recent studies have shown that STAT1 suppresses mouse mammary gland tumorigenesis by immune regulatory as well as tumor cell-specific functions of STAT1.
Statistics
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PSSM-Id: 341076
Aligned: 10 rows
Threshold Bit Score: 278.592
Created: 4-Nov-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dimer interfaceCCD-DBD
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   ##  ##  #  ##  #                                      
1YVL_A        138 KQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREhetngvaks------dqkqeqllLKKMYLMLDNKRK 211  human
1BF5_A          3 KQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREhetngvaks------dqkqeqllLKKMYLMLDNKRK 76   human
NP_001134757  137 KQKELDNNVKDLRNRVQDAEHEIKSLEDLQDEHDFKKKTLQSRVeqevngmaqlqavrkeireeeivIRKMFIKLNITRG 216  Atlantic salmon
Q6P943        139 KNREMDARVKDIKNKVQDAEQTIKNLEDLQDEYDFKNKTYQSRDelngtiske------dlnreklmIHAMFVKLNDKRI 212  zebrafish
Q4RMW2        136 EKQKLDAKVKEMKDSVLMADQSIKNLEDQQDEYDFKINTLKNREnemngmtak------elekekltVNRMCLELKAKRQ 209  spotted green...
Q5ZJK3        140 KQKELDAKVKAVKNSVTDVEQDIKTLEDVQDEYDFKHKTFQNREyepngasqe------eckkeqmnLQKMFFLLDIKRK 213  chicken
Q801Y2        137 QQNELANKINNLKTSVQEIEQDIQVLEDVQDEYDFKRKTLQSRVeaemnsqkt-----keiqleemaIRQMFIGLGMKRE 211  goldfish
EPY79445      531 SQLDDQYSRFSLENNFLLQHNIRKSKRNLQAQSGNIQSTVMLDKqk--------------------eLDSKVRNVKDKVM 590  wild Bactrian...
AAM51552      138 KQKELDKKVTDVRNRANEVEQDVKLLEDLQDEYDFKFKTVQSRKnehnglaqn------elkkekmfLTNMNIGVLVKRK 211  African clawe...
CAD43455      652 KQQVLDRKVGMLEESMQQTEHDIQVLKDMQYDYDNKRKTVESREsetkc--------------qtpkEMKLEEAEQMFTG 717  zebrafish
Feature 1                             #   #  ### ##           ## ##  ##  #   #  #                 
1YVL_A        212 EVVHKIIELLNVTELTQNALINDELVEWKRRQQsaciggpPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKytyeh 291  human
1BF5_A         77 EVVHKIIELLNVTELTQNALINDELVEWKRRQQsaciggpPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKytyeh 156  human
NP_001134757  217 VVVNQISDILCLAEQIQFNLVTVEVPEWKHRQQiaciggpPNACLDQLQIWFTAVAEGLQQVRQQLKKLQELEQKytyen 296  Atlantic salmon
Q6P943        213 MAISQMSEVLNLVEPVICELISTELVEWKRRQQmacigglTNVCLDQLQNWFTSLGESLLQSRQQLKKLLELEQKlsyst 292  zebrafish
Q4RMW2        210 DAVLQLTDLLNVIQALLADLINEELPEWKQRQQiaciggpPNACVDQLQNWFTAVAESLQQVRQHLKKLQELEQKltyes 289  spotted green...
Q5ZJK3        214 EVVAKIIQLLNTTEHTQSALINEELVEWKRRQQtaciggpPNACLDQLQNWFTIIAESLQQVRQQLKKLEELEQKltydp 293  chicken
Q801Y2        212 VVIREMANVLTLAEQIQFTLISDELPEWKKRQQmaciggpPNACLDQLQSWFTVVAECLQQIRQQLKKVQELVQKftynn 291  goldfish
EPY79445      591 EVVHKIIELLNVTELTQKALINDELVEWKQRQQsaciggpPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKytyeh 670  wild Bactrian...
AAM51552      212 GIIPKIAELMSVTDHTQSALINEELVEWKHRQQiaciggpPNACLDQLQSWFTTIAKSLLQVRQQLKKLEELEQKltydi 291  African clawe...
CAD43455      718 GLNIKGEVRLLMYCLAHITLISKELPEWKKRQQmaciggpHNTCLDQLQNSFTVVAECLQQIRQQLKKVQELVQKftysn 797  zebrafish
Feature 1                       #  ###  
1YVL_A        292 DPITKNKQVLWDRTFSLFQQLI 313  human
1BF5_A        157 DPITKNKQVLWDRTFSLFQQLI 178  human
NP_001134757  297 DPITQGKSALEERALTLFKYLI 318  Atlantic salmon
Q6P943        293 DPITCSKISLEERIMSNLKNLV 314  zebrafish
Q4RMW2        290 DPITQKKAFLEARALELLKNIL 311  spotted green pufferfish
Q5ZJK3        294 DPITKNKQVLQDRTHSLFKQLI 315  chicken
Q801Y2        292 DPLTLGKSQLDEQALSLFKNLI 313  goldfish
EPY79445      671 DPITKNKQALWDRTFSLFQQLI 692  wild Bactrian camel
AAM51552      292 DPITCNKQALQERTQSLFKQLL 313  African clawed frog
CAD43455      798 NSLNLGRGQLDEQAISLFKNLI 819  zebrafish

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