Conserved Protein Domain Family
RA_RASSF1

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cd17218: RA_RASSF1 
Ras-associating (RA) domain found in Ras-association domain-containing protein 1 (RASSF1)
RASSF1 is a member of a family of six related RASSF1-6 proteins (the classical RASSF proteins). RASSF1 has eight transcripts (A-H) arising from alternative splicing and differential promoter usage. With the exception of some minor splice variants (RASSF1F and RASSF1G), RASSF1 contains an RA domain and a C-terminal SARAH protein-protein interaction motif. The RA domain of the classical RASSF proteins has a beta-grasp ubiquitin-like fold with low sequence similarity to ubiquitin. The RA domain mediates interactions with Ras and other small GTPases, and the SARAH domain mediates protein-protein interactions crucial in the pathways that induce cell cycle arrest and apoptosis. RASSF1A and 1C are the most extensively studied RASSF1 with both localized to microtubules and involved in regulation of growth and migration.
Statistics
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PSSM-Id: 340738
Aligned: 6 rows
Threshold Bit Score: 277.117
Created: 7-Jul-2015
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative RA-Raskey conserved
Feature 1:putative RA-Ras interaction site [polypeptide binding site]
Evidence:
  • Comment:Based on the structural evidence that Mus musculus RASSF5 (3DDC) interacts with Ras, contacts at 4A.
  • Comment:RASSF5 is a member of non-enzymatic adaptors of Ras that forms a unique Ras switch II binding site.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         # ##            #                                           # #
Q9NS23       134 LSQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKVQLKLVRPVsvpsskkppslqd-arrgpgrgtsvrrRTSFYLPK 212 human
AAH93276      62 LSVTEIQQKVKEYNAQVNSNLFMVLNRDGSYTGFIKVQFKLARPVslppprsvssssi-sssclgwdggcqeRTSFYLPR 140 zebrafish
XP_007888661 165 LSRDEIERKIRDYNAQIANNLLMTLNSDGTYTGFIKVQLKLVRPIsvsantkpqsiydtkktgatrsqpvkrRTSFYLPK 244 elephant shark
ETE73347      63 LSQADIEQKIKEYNSQINSNLFMSLNKDGSYTGFIKVQLKLIRPVsvpankkapsiqd-trkssirsqavkrRTSFYLPK 141 king cobra
NP_001085978  64 LSKAETDQKIKDYNAQIKSNLFMSLNKDGSFTGFIKVQLKLVRPVsvaaskkpsclqd--rkgsgrsqpvkrRTSFYLPK 141 African clawed ...
XP_005987076  60 LSQSEIEQKVKEYNTQINSNLFMTLGKDGSYTGFVKVQLKLVRPVsvpankkpsvyna--kqtstrsqavkrRTSFYLPK 137 coelacanth
Feature 1        ##### #                ###                                                    
Q9NS23       213 DAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFERAeRHGQVYLRKLLDDEqPLRLRLLAGPsdKALSFVLKEN 290 human
AAH93276     141 DTVKHLHISSSTRAREVIQALLNKFTVVDNPAKYSLYERSqRDNQVYLRKLADDEcPLFLRLCAGPneKVLSLVLKEN 218 zebrafish
XP_007888661 245 DTVKHLHISSVTRASEVIEALLNKFLVVDNPRKFALFERIeKEDQVYTRKLSDEEhPLYLRLLAGPddKMLSLVLREN 322 elephant shark
ETE73347     142 DTIKHLHIISRTRASEVIEALLKKFMVVDNPRKFALFERTeKDDQVYIRKLSDEDqPLRLRLLAGPneKTLSFVLKEN 219 king cobra
NP_001085978 142 DASKHLHLSSKTPASEVIQALLKKFTVLDNPRKFALFERTeKGGQVSLRKLTDDEePLKLRLLSGPceKTLSFVLKEN 219 African clawed frog
XP_005987076 138 DTFKHLHISSKTKASEVIEALLKKFMVVDNPRKFALFERAeKEDQVYLRKLSDEErPLYLRLLAGPneKTLSFVLKEN 215 coelacanth

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