Conserved Protein Domain Family
SM-ATX

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pfam14438: SM-ATX (this model, PSSM-Id:339226 is obsolete and has been replaced by 464173)
Ataxin 2 SM domain
This SM domain is found in Ataxin-2.
Statistics
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PSSM-Id: 339226
Aligned: 120 rows
Threshold Bit Score: 48.6803
Created: 4-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6BJB7         36 SDKLLHLVAKSIGKKCIVTVSSGARYQGLLVSADLssqqgqdvSSPLSIVLQSPQIFSKsli----dekSNADKSNEIPE 111  Debaryomyces ...
G5ED29         11 NGDVLSAINDMIGRVIIINTTDKKRYSGVLGAVSQ----------DFDFGMQCVVEITKen------enNLLRTESECRD 74   Caenorhabditi...
XP_002985896   13 sskgsanFDSYIGSLISLTSKSDIRYEGVLYTIDA--------EN-CNIALQNVRSYGTegrk---kegPQIPPRDSVYD 80   Selaginella m...
EGT34835       11 NPDVLFAIHDMVGRVIMIDTVDKKRYSGVLGAIS----------EDFIFGVHCVVEITKen------qsNLLRTESEVID 74   Caenorhabditi...
XP_003110811   11 NGDVLCAINDMIGRVILVSTTDKKRYSGVLDAVS----------KDLAFGLQCVVELTKen------enNLLRTESEVVE 74   Caenorhabditi...
BAT98892        6 ASRSSSAADTYIGSLISLTSKSEIRYEGILYNINTe---------ESSIGLRNVRSFGTegrk---kdgPQIPPGDKVYE 73   Vigna angular...
XP_006385151    6 SSSSSKAGESYIGSLISITSKYEIRYEGVLYHINPq---------DATIGLKNVRSYGTegrk---kdgPQIAPSDKVYE 73   black cottonwood
XP_001775920    3 RGRGPNTADSYIGSLISLTSKSEIRYEGILYTVDT---------ENSNIALQNVRSFGTegrk---kdgPQIPASDKVYD 70   Physcomitrell...
XP_001631367   45 NPCFVHAVTSLIGCHVQLTAVNGSVYDGILRTVSP----------KVEVVLDVAHLVTKkiqhgspeeyIQVPSKSATMD 114  starlet sea a...
EKC35142       59 NSRFSHLLASLVGCVVQLQVKNGGVYDGILKTNSP----------RMDVVLEMAHKHEEssnn---ntnNTTPSKDRLIE 125  Pacific oyster
Q6BJB7        112 KLVIQAKDLMDLEVS 126  Debaryomyces hansenii
G5ED29         75 KMVFHYSDIVDFAYV 89   Caenorhabditis elegans
XP_002985896   81 YIIFRGSDIKDLQVK 95   Selaginella moellendorffii
EGT34835       75 KMMFQYKDVVDFAFi 89   Caenorhabditis brenneri
XP_003110811   75 KMMFNFEDIVDFAyv 89   Caenorhabditis remanei
BAT98892       74 YILFRGTDIKDLQVK 88   Vigna angularis var. angularis
XP_006385151   74 YILFRGSDIKDLQVQ 88   black cottonwood
XP_001775920   71 YIIFRGSDIKDLQVK 85   Physcomitrella patens
XP_001631367  115 TFVIAARNIISIDAL 129  starlet sea anemone
EKC35142      126 KVIFNMSDILSINVV 140  Pacific oyster
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