Conserved Protein Domain Family
7tmB1_PACAP-R1

?
cd15987: 7tmB1_PACAP-R1 
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors
Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.
Statistics
?
PSSM-Id: 320653
Aligned: 5 rows
Threshold Bit Score: 523.762
Created: 7-Jul-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
  next features
Feature 1:putative polypeptide ligand binding pocket [polypeptide binding site]
Evidence:
  • Comment:based on mutagenesis of human glucagon receptor (GCGR), and modeling studies of GCGR and other related class B GPCRs
  • Comment:Residues in the globular N-terminal extracellular domain and the extracellular loops of the 7TM domain may also be involved in ligand binding.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1               #   #                                         #  ##  #                #  
P70205       150 YLSVKALYTVGYSTSLVTLTTAMVILCRFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWILYAEQDSSHCfvsTVECKAV 229 house mouse
NP_001092076 153 YLSVKALYTVGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAEQDGNHCfisTVECKAV 232 chicken
NP_001136397 128 YASVKALYTVGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAEEDSDHCfvhTVGCKAV 207 zebrafish
AAI70104     147 YLSVKALYTVGYSTSLVALTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDEVLYAEQDNNHChlsTVECKVV 226 African clawed ...
CAG12268      74 YASVKALYTVGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAQEDSDHCfthTVACKAV 153 spotted green p...
Feature 1            #                                                                      ## # 
P70205       230 MVFFHYCVVSNYFWLFIEGLYLFTLLVEtffPERRYFYWYTIIGWGTPTVCVTVWAVLRLyfddaGCWDmndSTALWWVI 309 house mouse
NP_001092076 233 MVFFHYCVMSNYFWLFIEGLYLFTLLVEtffPERRYFYWYTIIGWGTPTICVTVWAVLRLhfddtGCWDmndNTALWWVI 312 chicken
NP_001136397 208 MVFFHYCVMSNYFWLFIEGLYLFTLLVEtffPERRYFYWYTIIGWGTPTICVTIWAVLRLhfddsGCWDmndNTALWWVI 287 zebrafish
AAI70104     227 MVFFHYCVMSNYFWLFIEGLYLFTLLVEtffPERRYFYWYTIIGWGTPLICVTIWAVLRLhfdnlGCWDtnnNTALWWVI 306 African clawed ...
CAG12268     154 MVFFHYCVMSNYFWLFIEGLYLFTLLVEtffPERRYFYWYTIVGWGTPTICVTVWAVLRLhfndtGCWDtneNTALWWVI 233 spotted green p...
Feature 1        #                                                                               
P70205       310 KGPVVGSIMVNFVLFIGIIIILVQKLQSPDMGGNEssiyfscvqkcyckpqraqqhsckmselstITLRLARSTLLLIPL 389 house mouse
NP_001092076 313 KGPVVGSIMINFVLFIGIIVILVQKLQSPDIGGNEs----------------------------sIYLRLARSTLLLIPL 364 chicken
NP_001136397 288 KGPVVASIMINFVLFIGIIIILVQKLQSPDIGGNEs----------------------------sIYLRLARSTLLLIPL 339 zebrafish
AAI70104     307 KGPVIGSIMINFVLFVGIIIILVQKLQSPDIGGNEs----------------------------sIYLRLARSTLLLIPL 358 African clawed ...
CAG12268     234 KGPVVASIMINFVLFIGIIIILVQKLQSPDIGGNEs----------------------------sIYLRLARSTLLLIPL 285 spotted green p...
Feature 1            #  #            #   #                               
P70205       390 FGIHYTVFAFSPENvSKRERLVFELGLGSFQGFVVAVLYCFLNGEVQAEIKRKWRS 445 house mouse
NP_001092076 365 FGIHYTVFAFSPENvSKRERLVFELGLGSFQGFVVAVLYCFLNGEVQSEIKRKWRS 420 chicken
NP_001136397 340 FGIHYTVFAFSPEDfSKRERLVFELGLGSFQGFVVAVLYCFLNGEAQSEIKRKWRS 395 zebrafish
AAI70104     359 FGIHYTVFAFSPENvSKRERLVFELGLGSFQGFVVAILYCFLNGEVQSEIKRKWRS 414 African clawed frog
CAG12268     286 FGIHYTVFTFSPEEvSKKERLVFELGLGSFQVCIGMLFPRLFSCASTSTLFFSFSG 341 spotted green pufferfish

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap