Conserved Protein Domain Family
RING-HC_MEX3B

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cd16721: RING-HC_MEX3B (this model, PSSM-Id:319635 is obsolete and has been replaced by 438381)
RING finger, HC subclass, found in RNA-binding protein MEX3B
MEX3B, also known as RING finger and KH domain-containing protein 3 (RKHD3), or RING finger protein 195 (RNF195), is a RNA-binding phosphoprotein that localizes in P-bodies and stress granules, which are two structures involved in the storage and turnover of mRNAs. It regulates the spatial organization of the Rap1 pathway that orchestrates Sertoli cell functions. It has a 3' long conserved untranslated region (3'LCU)-mediated fine-tuning system for mRNA regulation in early vertebrate development such as anteroposterior (AP) patterning and signal transduction. MEX3B contains two K homology (KH) domains that provide RNA-binding capacity, and a C-terminal C3HC4-type RING-HC finger. Like other MEX-3 family proteins, MEX3B shuttles between the nucleus and the cytoplasm via the CRM1-dependent export pathway.
Statistics
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PSSM-Id: 319635
Aligned: 7 rows
Threshold Bit Score: 101.116
Created: 20-Mar-2015
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Mus musculus Hakai (3VK6) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #           # #   #  #           #  # 
Q6ZN04       516 RDCSVCFESEVIAALVPCGHNLFCMECANRICEKsePECPVCH 558 human
EMP29169     323 RDCSICFESEVIAALVPCGHNLFCMECANRICEKtePQCPVCH 365 green seaturtle
A1L3F4       454 RECSICFESEVIAALVPCGHNLFCMECANRICEKnqPQCPVCH 496 African clawed frog
XP_005989663 481 RDCSICFESEVIAALVPCGHNLFCMECANRICEKsePQCPVCH 523 coelacanth
NP_001074462 484 RDCSVCFESEVIAALVPCGHNLFCMECANRICERnePKCPVCH 526 zebrafish
XP_002730746 475 KECMMCFESEVVAALVPCGHNLFCMECANRLMEKsdPECPVCH 517 Saccoglossus kowalevskii
KFM65465     469 RDCAVCFESEIVAALVPCGHNMFCLECANRICEKaePECPICR 511 Stegodyphus mimosarum

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