Conserved Protein Domain Family
RING-HC_RNF20_like

?
cd16704: RING-HC_RNF20_like (this model, PSSM-Id:319618 is obsolete and has been replaced by 438364)
RING finger, HC subclass, found in RING finger protein RNF20, RNF40, and similar proteins
RNF20, also known as BRE1A, and RNF40, also known as BRE1B, are E3 ubiquitin-protein ligases that work together to form a heterodimeric complex that facilitate the K120 monoubiquitination of histone H2B (H2Bub1), a DNA damage-induced histone modification that is crucial for recruitment of the chromatin remodeler SNF2h to DNA double-strand break (DSB) damage sites. RNF20 regulates the cell cycle and differentiation of neural precursor cells (NPCs) and links histone H2B ubiquitylation with inflammation and inflammation-associated cancer. RNF40, also known as 95 kDa retinoblastoma-associated protein (RBP95), was identified as a novel leucine zipper retinoblastoma protein (pRb)-associated protein that may function as a regulation factor in the process of RNA polymerase II-mediated transcription and/or transcriptional processing. All family members contain a C3HC4-type RING-HC finger at its C-terminus.
Statistics
?
PSSM-Id: 319618
Aligned: 7 rows
Threshold Bit Score: 81.805
Created: 23-Mar-2015
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Saccharomyces cerevisiae Bre1 (4R7E) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #           # #  #  #           #  #     
O75150        946 LTCPCCNtrkKDAVLTKCFHVFCFECVRGRYEaRQRKCPKCNAAFG 991  human
Q5VTR2        920 LTCPCCNmrkKDAVLTKCFHVFCFECVKTRYDtRQRKCPKCNAAFG 965  human
CDQ71072      913 LRCPCCNtrdKETVLTKCFHVFCYECLKTRYDtRQRKCPKCNCAFG 958  rainbow trout
XP_797688     945 LTCPCCKkgrKDVVLTKCFHVFCFNCIKTRYEtRQRKCPKCNAGFG 990  purple urchin
XP_006818089  853 LTCPCCNvkrKDTVLTKCFHLFCSECIKTRYEtRQRKCPECNAAFG 898  Saccoglossus kowalevskii
CBY24503       34 LKCPICNieeKNAILTKCFHVFCYKCLKTRYEtRQRKCPKCNQNFG 79   Oikopleura dioica
XP_012554642  820 LTCPCCNthgKDAILTKCFHVFCFECLKTRYDtRQRKCPKCNATFG 865  Hydra vulgaris

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap