4KBL,4KC9


Conserved Protein Domain Family
RING-HC_RBR_HHARI

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cd16626: RING-HC_RBR_HHARI (this model, PSSM-Id:319540 is obsolete and has been replaced by 438288)
Click on image for an interactive view with Cn3D
RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins
The family includes Drosophila melanogaster protein ariadne-1 (ARI-1), and its eukaryotic homologs, such as HHARI. ARI-1 is a novel widely expressed Drosophila RING-finger protein that localizes mainly in the cytoplasm and is required for neural development. It interacts with a novel ubiquitin-conjugating enzyme, UbcD10. HHARI, also known as H7-AP2, monocyte protein 6 (MOP-6), protein ariadne-1 homolog, Ariadne RBR E3 ubiquitin protein ligase 1 (ARIH1), ariadne-1 (ARI-1), UbcH7-binding protein, UbcM4-interacting protein, or ubiquitin-conjugating enzyme E2-binding protein 1, is a RBR-type E3 ubiquitin-protein ligase highly expressed in nuclei, where it is co-localized with nuclear bodies including Cajal, PML, and Lewy bodies. It interacts with the E2 conjugating enzymes UbcH7, UbcH8, UbcM4, and UbcD10 in human, mouse, and fly, and modulates the ubiquitylation of substrate proteins including single-minded 2 (SIM2) and translation initiation factor 4E homologous protein (4EHP). It functions as a potent mediator of DNA damage-induced translation arrest, which protects stem and cancer cells against genotoxic stress by initiating a 4EHP-mediated mRNA translation arrest. HHARI contains a RBR domain that was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been corrected as RING-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently. The RBR (RING1-BRcat-Rcat) domain use an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase function to facilitate the ubiquitination reaction. This family corresponds to the RING domain, a C3HC4-type RING-HC finger required for RBR-mediated ubiquitination.
Statistics
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PSSM-Id: 319540
Aligned: 21 rows
Threshold Bit Score: 80.1087
Created: 24-Jul-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteRING-HC finger
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #              # #  #  #                     #    #      
4KBL_A       187 PCQICYLNYPns-yFTGLECGHKFCMQCWSEYLTTKIMEEGm--GQTISCPAHGCDILVDD 244 human
4KC9_A       187 PCQICYLNYPns-yFTGLECGHKFCXQCWSEYLTTKIXEEGx--GQTISCPAHGCDILVDD 244 human
EAL50289      92 TCDVCYEEVNe---VTGLSCGHYYCKNCWREYIEEAMKRGPnfiDSLCMCQGCYCKIHHEL 149 Entamoeba histolytica HM-1:IMSS
Q6NW85       161 PCQICYLNYPns-yFTGLECGHKFCMQCWGDYLTTKIIEEGm--GQTISCPAHNCDILVDD 218 zebrafish
Q6PFJ9       155 PCQICYLNYPns-yFTGLECGHKFCMQCWGDYLTTKIIEEGm--GQTISCPAHSCDILVDD 212 zebrafish
Q32NS4       157 PCQICYLNYPns-yFTGLECGHKFCMQCWGEYLTTKIIEEGm--GQTISCPAHGCDILVDD 214 African clawed frog
EDV21022     145 VCDICYLPSQh---MNGLQCGHFFCIDCWNEYLRIKIIDEGq--GQKIACPANDCNILTDY 200 Trichoplax adhaerens
Q54CX4       615 ECKICYMEYDqsneVFTLECDHVYCFDCITEHLRILITEGR---VLDISCPHPQCKKEIKE 672 Dictyostelium discoideum
XP_007906944 154 VCAICYLNYPns-yFTGLECGHKFCMQCWNEYLTTKIIEEGm--GQTISCPAHGCDILVDD 211 elephant shark
KFO95266      60 PCQICYLNYPns-yFTGLECGHKFCMQCWSEYLTTKIMEEGm--GQTISCPAHGCDILVDD 117 Anna's hummingbird

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