Conserved Protein Domain Family
SAP130_C

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pfam16014: SAP130_C (this model, PSSM-Id:318271 is obsolete and has been replaced by 464973)
Histone deacetylase complex subunit SAP130 C-terminus
Statistics
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PSSM-Id: 318271
Aligned: 6 rows
Threshold Bit Score: 598.087
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012825462  595 AQGSSPRPSILRKKPATDGLSVRKSLIPPHPGDAVSPRQDSSLRSTSASPRPAGAKPKADLHVPVAPGVTGDPGA----- 669  western clawe...
XP_007494039  634 AQGSSPRPSILRKKPATDGMAVRKSLIPPQPPEVTSPRVESSIRSTSGSPRPSGAKPKPEIHVSMATPVTVSVEAvsnqs 713  gray short-ta...
XP_006637717  644 tLISSPRPSILRKKPAGEGSAVRKNAFPSQAAEATSPRLDGAIRSATGSPRPAGAKSKPEIHVAVTPPVTVTVEAmsiqs 723  spotted gar
XP_005451265  634 TLVSSPRPSILRKKPANET-CVRKNLIPAQ-TEASTGRIDSGVRG-AGSPRPAGVKPKAEVHMAVAPPVMATVEAlpsqg 710  Nile tilapia
XP_005165953  650 TLVSSPRPSILRKKPVTEG-AVRKCLIQAQPSEPNAGRVDSGIRL-SGSPRPAGVKPKPDIHVAMAPPVMAAVEAlvghv 727  zebrafish
XP_007245136  632 TLVSSPRPSILRKKPAGEGAGVRKNLIPAQLGDP--GRMDVGIRGTSGSPRPAGVKPKPDILVGLAPPVNPAVEAltgqn 709  Mexican tetra
XP_012825462  670 ADQPNAAAsLPSSHhpaAAVP------S--PPSQPAS--GPIPSSIHITPAt---IPALSAPP--PLLSN---APS---G 728  western clawe...
XP_007494039  714 SDQPTIAV-QPTSQqppPAIPtiiaaaS--PPSQPSValSTIPGAVPVTPP----ITTIAAAT--PASSTvggSLStvmG 784  gray short-ta...
XP_006637717  724 SEQQAAPS---PAQhpsQAIPailtaaAaaPPSQPTAalAALPAAMAVTPPipasLANVVAPPtqPAASS---TAAcavS 797  spotted gar
XP_005451265  711 GEQQVVSS---NTQhltQAIPtmlatpGpvPPSQPSTvlSSLPAAMAVTPPvpasMANTVASPtqPAASS---TPAcatS 784  Nile tilapia
XP_005165953  728 GEQQTLST---PVQhhsQAIPtllappApaPPSQPTAvlSALPATMAVTPPvpasMANAVASPtqPAASS-----TaalS 799  zebrafish
XP_007245136  710 PDQQQNSA-LPPSQipaQPVSslltsaT--PTSQP------VPAAMAVTPPip-sMANVVAPPshPGATS---TAAcpiS 776  Mexican tetra
XP_012825462  729 AVIPEAKVKEEAEPMDISRpv-sVP-PLPPNSISSPLTVLANNISIPA--GELLPGASPRKKPRKQQHVISTEEGDMMET 804  western clawe...
XP_007494039  785 PAVPEIKIKEEVEPMDIMRpvsaVP-PLTTNTVSPSLALLANNLSMPP--SDLPPGASPRKKPRKQQHVISTEEGDMMET 861  gray short-ta...
XP_006637717  798 SALPEIKIKQEVEPMDTSQq---VP-SVTPTVVAPVLTPLGNSLGLSA--GDLLPGASPRKKPRKQQHVISTEESEMMET 871  spotted gar
XP_005451265  785 SVCPDVKIKQEVEAMDTSQ-----PdPNTSMSAAPALTTQTSTLSTPAt-GDLIPGASPRKKPRKQQHVISTEESEMVET 858  Nile tilapia
XP_005165953  800 STLPEVKIKQEAEPMDTSQa---VPlAPSLTGPAPSLSSQSSTLTVSSqpGELLPGASPRKKPRKQQHVISTEETEMVET 876  zebrafish
XP_007245136  777 STLPEIHVKQEAEQMDTSK-----P-------VGPAPPSGTPALAVPS--ADLTPGASPRKKPRKQQHVISTEESEMMEA 842  Mexican tetra
XP_012825462  805 NSTDEERChAVKPLTSRPEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKLTLQE 884  western clawe...
XP_007494039  862 NSTDDEKS-TPKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQE 940  gray short-ta...
XP_006637717  872 NSTDEEKS-TARPLAMKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKKCTLQD 950  spotted gar
XP_005451265  859 NSTDEEKT-PGRPITGRAERRESPPREYVDEEGVRYVPVKPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKKGSLQD 937  Nile tilapia
XP_005165953  877 NSTDEERA-SSRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKKGSLQD 955  zebrafish
XP_007245136  843 NSTDEERV-LTKPPSQRPEKRKSPPKEYIDEEGVRYVPVRIRPPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGSLQD 921  Mexican tetra
XP_012825462  885 VANQKGITCRVQGWKTHLCAAQLLQLIKLEQDVFERLTVLQEGLIPKKKTATDDDLHRINELIQGNMQRCKLVMDQITES 964  western clawe...
XP_007494039  941 IANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTTLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEA 1020 gray short-ta...
XP_006637717  951 MANQKGVVCRAQGWKIHLCAAQLLQLTSLERDVYSRLTTLQEGLIPKKKAGADDDLHRINELIQGNMQRCKLVIDQITEA 1030 spotted gar
XP_005451265  938 MANQRGVACRAQGWKIHLCAAQLRQLSSLEHDVYSRLSTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVTEA 1017 Nile tilapia
XP_005165953  956 MANQRGVACRAQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVTEA 1035 zebrafish
XP_007245136  922 VANQKGVVCRAQGWKIHLCSAQLQQLTNLEHDAYSRLTTLQEGLVPKKKSGGDDDLHRISELIQGNMQRCKLVMDQITEA 1001 Mexican tetra
XP_012825462  965 RDCMLKVLDHKDRVLKLLN 983  western clawed frog
XP_007494039 1021 RDSMLKVLDHKERVLKLLN 1039 gray short-tailed opossum
XP_006637717 1031 RDAMMKVLDHKDRVMKLLN 1049 spotted gar
XP_005451265 1018 RDTMMKVLDHKEKVLKLLN 1036 Nile tilapia
XP_005165953 1036 RDTMMKVLDHKDRVLKLLN 1054 zebrafish
XP_007245136 1002 RESMMKVLDHRERVLKLLN 1020 Mexican tetra
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