Conserved Protein Domain Family
TMCO5

?
pfam14992: TMCO5 (this model, PSSM-Id:317412 is obsolete and has been replaced by 464427)
TMCO5 family
The TMCO5 family includes human transmembrane and coiled-coil domain-containing proteins 5A and 5B.
Statistics
?
PSSM-Id: 317412
Aligned: 24 rows
Threshold Bit Score: 195.284
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
A8MYB1        30 CLNSDLEKDLQKLDMENQVLLRKIKEKEETIS-----SLERKLAL--SL--EEAKEEEELNYVIDEQEESLRE------- 93  human
XP_001380899  31 SLNMDLEKDLQKIDEANQSLLLKIQMEEDVNN-----RLEDELAR--LAklVQEQEKKEQEYTLSDKEQDLKN------- 96  gray short-tail...
XP_003475723  30 SLNTDLEKDMQRIDEANQEMLLKIQEKEHEIQ-----RLESEITQmeDS--ARDEEWEKENFMIVEKERALQE------- 95  domestic guinea...
XP_008773695  38 SLNMDLERDMQRIDEANQELLLKIQEKESEVQ-----RLEHEITQtgDP--AEDEEWEKENYTVMEREQALQE------- 103 Norway rat
XP_007480080  31 SLNMDLEKDLQKIDEANQSLLLKIQMEEDVNN-----RLEDELARlaKL--VQEQEKKEQEYTLSDKEQDLKN------- 96  gray short-tail...
XP_005664088  11 pvqMKTIGKEQELMEKNNSFLQNTDAAEGTMQ-----NLLREFTKmdRI--LDRSDDED-IFSENPPTDFLHDletekwd 82  pig
DAA29448      11 PLQMKPVGKEQELTEKNNGFLQNIDAAEGTVQkqvraDLLREFTKmdHN--LDRTDDED-IFSENRQTDFLQDlet--kk 85  cattle
XP_005328976  13 SLQTKTAGKEQPLTEKNNGFLQNLGVAEGAMN------LLREMTKmdQS--LDGLDDKDKVCSETPQTDFLHKd------ 78  thirteen-lined ...
XP_003792552  13 SLQTNTDWKEQQLTGKNNDFLHKCDATEGAAR-----NSPKEITRtnHV--LDRLEDEDDVFSENSQTDFHHKd------ 79  small-eared galago
XP_005611052  19 SLQMEAVGKEQELTKKNNGFLQNIDAAEGTMQ-----NLLREFTKmdHV--LDRSDDEDEIFSENPQTDFLREveteewd 91  horse
A8MYB1        94 -LELE----------------------------TAKLEKSN--AI----------------------------------- 107 human
XP_001380899  97 -LKLE----------------------------TSKLEKIN--EA----------------------------------- 110 gray short-tail...
XP_003475723  96 -LEEK----------------------------SAKLERKN--ET----------------------------------- 109 domestic guinea...
XP_008773695 104 -LEEE----------------------------TARLERKN--ET----------------------------------- 117 Norway rat
XP_007480080  97 -LKLE----------------------------TSKLEKIN--EA----------------------------------- 110 gray short-tail...
XP_005664088  83 mLELEaesdhnpqsepdeqekdhiphedpqastSLQFSEKNipQL----------------------------------- 127 pig
DAA29448      86 wLELKaghgqdlqneqdeqerdhiqhedpqastSLQFSEENilEQsqenmffqlnhwntrmglqvkelgadhigwmekik 165 cattle
XP_005328976  79 mLEPKaeqgqdlqkeqdeq-kpdlvhevpqvstSMLFPENKipELspqriflrlnywnakmglqvkdvgadhidwmekin 157 thirteen-lined ...
XP_003792552  80 tLEQEaeynqdpqseqde--qetdtredppvstSVQFSEGNipELcpqsmffrlnywntkmdlqvqelgtdhvgwlekin 157 small-eared galago
XP_005611052  92 vLEPEaehdqdlqseedeqetdcfqhedpqvstSLPFSEENipELsqeniffqlnhwntqmgqqvkelgadhtdwmekik 171 horse
A8MYB1       108 ---------------LSRNVVEVQKKISGLF-TNI-G---LEEettkqileEMKAR-------------------LQKST 148 human
XP_001380899 111 ---------------LTQGIVELQSQLSGKT-HAP-KallPAEenlsespeVAKMK-------------------MHQAE 154 gray short-tail...
XP_003475723 110 ---------------LVHSITELQRKLARKPyKIT-K---YAQcdldsnseELQVK-------------------LQQLE 151 domestic guinea...
XP_008773695 118 ---------------LVHSISELQRKLTRKSqKIV-R---CEQgdlertpeESKVK-------------------LQLLE 159 Norway rat
XP_007480080 111 ---------------LTQGIVELQSQ----------------------------MK-------------------MHQAE 128 gray short-tail...
XP_005664088 128 ---------------LLSEVMSLEGQIENLGsHQDlD---PEE--------GVNMEekimeikrqlgemdnkfvqADACN 181 pig
DAA29448     166 niiqkisltentvksLLSEVVSLEGQIEKLEsHQDlD---SDQ--------GVNME-------------------EDACD 215 cattle
XP_005328976 158 niiqkinttestvksLLNEVMSLEGQTENLGd-RGlD---PVK--------EANIEekiieirkqlremnnkltqVDACN 225 thirteen-lined ...
XP_003792552 158 siirkinvtentvksLLNEVMYLEEQTEMAEd-QDlD---PNQ--------GVYIEekiteirkqlgemdnkfnqAGVCN 225 small-eared galago
XP_005611052 172 niiqkinltentvksLINEVMSLEGQIEKLEsHQDlN---PDQ--------GTNIEekimeikkqlgeianeivqADACN 240 horse
A8MYB1       149 ESCAKQEEELAKIESdyqsvsdLCKDQVYYIKK---YQEVLRKMKE----------EKETLLLEKQISKAQDDSSQTVkp 215 human
XP_001380899 155 KSLAEQEKELAKVLDefesvqqLCEAQAYCIKK---YQEALKKMEE----------EVENRFLEREVSKVLSISSETArp 221 gray short-tail...
XP_003475723 152 ASCADQEKKLAKIIEdyafvvqLCEDQALCIKK---YQETLRRIEE----------ELETRFLEREVSKVLSMDSLRRny 218 domestic guinea...
XP_008773695 160 SSCADQEKELGKIMEdyvfvsqLCEDQALCIKK---YQEALKRIEE----------ELETG------SKVLSMDSEREkt 220 Norway rat
XP_007480080 129 KSLAEQEKELAKVLDefesvqqLCEAQAYCIKK---YQEALKKMEE----------EVENRFLEREVSKVLSISSETArp 195 gray short-tail...
XP_005664088 182 EAHELKEKLIARIEN-------FCKGMTLLNTKlgiYQMQGEKTDSqspee-mgseEREPLLPQAPIPALVQNSPPRI-- 251 pig
DAA29448     216 EAHKLKEKLVARIEN-------FCKDMALLDTKlgmYQMQ-GNPDSqspee-mgmdEKEPLLLQASSPSLEESSPPHI-- 284 cattle
XP_005328976 226 EAHELKEKLIERIEN-------FYKEMTLLNTKlgmYQIQERETDSynsee-mnveETDPLLPEASPPPLEQNSPPHI-- 295 thirteen-lined ...
XP_003792552 226 EANALKEKFIERMED-------FCKDMALLNKKlrlYQMREGNTDSeyspeeldgeETESRLLQAPPPALRQNSPPRV-- 296 small-eared galago
XP_005611052 241 EAHELKEKLIERIEN-------FSKDMTLLNAKlemYQMQAGKTDSqnpee-mgmeEMQPLLPQAPPPPLVQNSPPRI-- 310 horse
A8MYB1       216 gsiladttqrnmerttikkqeRRCWYKYFQ-YLTFMVLVFIRLLAYVIFhlqyINPDLLVD-VLPLVLSRGTLESLRKVS 293 human
XP_001380899 222 gltlvddiqndaemvsvekkrSLFWYKTLG-YLFFTILLFTRLQGYLLFhinhVNPDLILD-TLPKMMGRSTLYRLRHFL 299 gray short-tail...
XP_003475723 219 inlnkl-------sgrvlkssWTFLFRIFH-CLFFIVLFVVRLLGYVLLhitfINPDLLVN-TLPKILSRSNLWKLRCFL 289 domestic guinea...
XP_008773695 221 vslnek-------dgfisngaLRFSKRIFR-SLLFSTLFFIRLLGYLIFhlsfINPDLLVN-ALPKILSRDVLWKLRCFL 291 Norway rat
XP_007480080 196 gltlvddiqndaemvsvekkrSLFWYKTLG-YLFFTILLFTRLQGYLLFhinhVNPDLILD-TLPKMMGRSTLYRLRHFL 273 gray short-tail...
XP_005664088 252 ---------------------TM-WKRALKiFILLYVVIFTGLSCYILL----FDATFIFErILPTILGRRRMWELRE-I 304 pig
DAA29448     285 ---------------------TM-WKCALRiFIMFYVLTLTGLSCYILF----FDATFIFEkVLPTILGRRRMWELREIL 338 cattle
XP_005328976 296 ---------------------AA-WKRALRiFIMFYVLTFTGISCYVLF----VDATFIFErVLPSILGRSTMWELREMI 349 thirteen-lined ...
XP_003792552 297 ---------------------TV-WKCALRiFIMFYVLVFTGLSCYTLF----FDATFIFErVLPRMLGRRTMWELREII 350 small-eared galago
XP_005611052 311 ---------------------AVWWKRALRiFITFYVLTFTGLLCYTLF----FDATFIFErVLPAMLGRRRMWELREII 365 horse
A8MYB1       294 HPFLTLAVEEALP 306 human
XP_001380899 300 LPFFTLEAEEVLP 312 gray short-tailed opossum
XP_003475723 290 FPSLTLETEDLLP 302 domestic guinea pig
XP_008773695 292 FPSLTLETEDMLP 304 Norway rat
XP_007480080 274 LPFFTLEAEEVLP 286 gray short-tailed opossum
XP_005664088 305 Shrs--------- 308 pig
DAA29448     339 APFLNLEVEDLLP 351 cattle
XP_005328976 350 GPFLNLEVEDLLP 362 thirteen-lined ground squirrel
XP_003792552 351 APFLNLQVEDLLP 363 small-eared galago
XP_005611052 366 APFLNLEVEDLLP 378 horse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap