4TWK,3VOU


Conserved Protein Domain Family
Ion_trans_2

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pfam07885: Ion_trans_2 (this model, PSSM-Id:311712 is obsolete and has been replaced by 462301)
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Ion channel
This family includes the two membrane helix type ion channels found in bacteria.
Statistics
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PSSM-Id: 311712
Aligned: 105 rows
Threshold Bit Score: 29.505
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4TWK_A 194 GCVLFVALPAIIFKHIeg-----------------wSALD-AIYFVVITLTTIGFGDYVAGgSDIeyldfyKPVV-WFWI 254 human
O34733  70 VIWISLFWSGWVLIYSsdphslme-----tqskepaSWSD-RIYFSGYVMFTLGNGDLAPNgGLW------KLVT-IIET 136 Bacillus subtilis sub...
Q9HPA3 494 TVALIVLSFGGLYYWFdliqpdltaq-apteslppvSLFD-AMYFSTMTFTTLGYGDFRPA-SQIg-----QILA-ISET 564 Halobacterium salinarum
Q81I81  43 IYTTVLIAFGLSYVVLeemgfavlkedgeslnahsfQLVEvCLYFSAVTLLSVGYGDISPI-GIG------RWIA-IAEA 114 Bacillus cereus ATCC ...
Q8CV55  53 VYITIMLGYGMIYFILslegivlvehgelrqvsiigSLIH-SVYFSGVTLLTIGYGDIIPI-GIG------RLIA-VSEA 123 Oceanobacillus iheyensis
Q9KEA6  47 VYTTVILAFAVVYLSLslqgfqviqavdfrsmasvwDIIEtTVYFSGVTLLTVGYGDYVPI-GIG------RYVA-LLQA 118 Bacillus halodurans
Q8FRG9  43 YALLLTLVVTLIVYFDrggy------------seelTFID-ALYYSTVSLTTVGYGDITPVtQEA------RLLNvLVIT 103 Corynebacterium effic...
Q8NSA2  24 YAMVLLVIVTMVVYFDrngy------------sedlTFID-ALYYSTVSLTTVGYGDITPVtQSA------RLINiIVLT 84  Corynebacterium gluta...
O53346  46 VAVVALLLTAGIVYVDrdgyld--------aqgdrlTFLD-CLYYAAVTLSTTGYGDITPIsEFA------RAINiFVIT 110 Mycobacterium tubercu...
Q9XA52  42 IALLVLVVTAVIVYADhdgytd--------nsdgsvDLLD-SFYYATVTLSTTGYGDITPVsDAA------RLTNiFVIT 106 Streptomyces coelicolor
4TWK_A 255 LVGLAYFAAVLSMIGDWLRV 274 human
O34733 137 AQGLLTITFSVTYLISVLSA 156 Bacillus subtilis subsp. subtilis str. 168
Q9HPA3 565 SAGVVLLALLVFVFGRRATR 584 Halobacterium salinarum
Q81I81 115 LIGYTLPFAFV--MRSVIDN 132 Bacillus cereus ATCC 14579
Q8CV55 124 LIGYILPAAFVLKVVQIGSR 143 Oceanobacillus iheyensis
Q9KEA6 119 LLGYLLPAAFV--VSTVMMR 136 Bacillus halodurans
Q8FRG9 104 PFRIAFLVLLVGTTLSVLTE 123 Corynebacterium efficiens
Q8NSA2  85 PARIGFLILLVGTTLSVLTE 104 Corynebacterium glutamicum
O53346 111 PLRIAFLILLVGTTLEVLTE 130 Mycobacterium tuberculosis
Q9XA52 107 PLRVLFLIILVGTTLEALTE 126 Streptomyces coelicolor
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