5ECJ,2P6V


Conserved Protein Domain Family
TAFH
?
pfam07531: TAFH (this model, PSSM-Id:311467 is obsolete and has been replaced by 462195)
Click on image for an interactive view with Cn3D
NHR1 homology to TAF
This corresponds to the region NHR1 that is conserved between the product of the nervy gene in Drosophila and the human mtg8b protein, which is hypothesized to be a transcription factor.
Links
?
Statistics
?
PSSM-Id: 311467
Aligned: 32 rows
Threshold Bit Score: 92.6605
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
5ECJ_A       209 QLSKLKRFLTTLQQFGNDI-SPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 287 house mouse
Q17EZ2        81 KLLKIRRFLGALVQFGQDT-NVDIGDRVRSLVLSLASGGLTVEEFQIAVQEATNFPLRSNVVPFLKSHVPVLQREITILS 159 yellow fever mo...
XP_006008532   1 ---------------------------------MHQNSTLTIEDFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLYCA 47  coelacanth
XP_012963366  49 QLSKLKRFLTTLQQFGNDI-SPEIGERVRTLVLGLVNSTLTIEEFHAKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 127 mallard
NP_001092855 122 QLSKLKRFLTTLQQFGNDI-SPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKVLLSSLVWKVFSNR 200 cattle
XP_009873301  86 QLSKLKRFLTTLQQFGNDI-SPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCA 164 Apaloderma vitt...
XP_002428748  91 NLGKLKRFLSTLVQFGAEI-NSELGDKVRNLVFSMVNGNLTIEEFHTNLQDATNFPLRPFVLPFLKTHLPLLQKELAFQA 169 human body louse
XP_003242960  91 NHSKLKRFLTTLVQFSGQI-SPQTSERVKGQIFTLVNNLISVEEFHHHIQEMTNFPLRPFVLPFLRTHLPSLQRDLLLMA 169 pea aphid
XP_012535518 227 ghgKLKRLLGTLVQFATDI-SADTGDTVRTLVLALLSGSMTAEEFHSALQEATNFPLRSFVLPYLKHTLPSLQRDLSNAA 305 pharaoh ant
AAA92045     213 LVSKMRKFLGALVQFSQELgQPEVSERVRALVLSLCSGSISVEEFRLALQEAINLPLRPYVVPLLKNSIALVQREILALA 292 fruit fly

5ECJ_A       288 RAAKQTPS 295 house mouse
Q17EZ2       160 RASKQTPT 167 yellow fever mosquito
XP_006008532  48 RLAKQTPA 55  coelacanth
XP_012963366 128 RMAKQSPA 135 mallard
NP_001092855 201 TVARSQQC 208 cattle
XP_009873301 165 RAAKQTPS 172 Apaloderma vittatum
XP_002428748 170 RIAKQSTS 177 human body louse
XP_003242960 170 RNNKQTLS 177 pea aphid
XP_012535518 306 RANNQSCV 313 pharaoh ant
AAA92045     293 RATNQSAL 300 fruit fly
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap