2BW3


Conserved Protein Domain Family
Dimer_Tnp_hAT

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pfam05699: Dimer_Tnp_hAT (this model, PSSM-Id:310361 is obsolete and has been replaced by 399013)
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hAT family C-terminal dimerisation region
This dimerisation region is found at the C terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily). The isolated dimerisation region forms extremely stable dimers in vitro.
Statistics
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PSSM-Id: 310361
Aligned: 47 rows
Threshold Bit Score: 43.0173
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2BW3_A 448 EFEFYRKEiVILSED---------FKVXEWWN--LNSKKYPKLSKLALSLLSIPASSAASERTFSLA--GNIITEKRNRI 514 house fly
Q18809 529 ELERWISE-PNIAFE----------EPIVFWQkaENRTRYPLLFQLSSIVLCLPGALLNTENLTSAK---NLLFEHQIGC 594 Caenorhabditis elegans
Q8S7P4 693 LEMQLGTFiDDMRRDerfkgletlAELSIKLVetNKHVLYDWVYLLLKLVLILPVATASVERVFSALsvVKSKLRNSMCD 772 Japanese rice
Q9D102 246 FYRQYAGFnFIAEDgsl-----sfIDLGSLFIqhALHNNIPCITKLLHIALSWPITSANNEKSFSTLshLKTYLLRTMGQ 320 house mouse
Q9H5R2 342 FYRHYAKLnFVIDDsci-----nfVSLGCLFIqhGLHSNIPCLSKLLYIALSWPITSASTENSFSTLprLKTYLCNTMGQ 416 human
O82185  59 LASDLFYElKILRealp---kevrRPIEVLDFlqKVEGCYPNSWIAYQVLLTIPVSVASAERSFSKLklIKSYLRSSMSQ 135 thale cress
Q9LSK4 514 DGEDLFMElKLLK-DvlpkeitkpVEVLDFLK--RMDGCYPNTWITYRILLTIPVSIASAERTFPKLklIKNYLRSTVPQ 590 thale cress
Q9SN25 612 DGNHLFLElKVLK-EllpteitkaIEVLNFLK--KFEGCYPNTWIAFRVMLTVPVSVASAERSFSKLklIKSYSRSTMSE 688 thale cress
Q9SKI5 466 DGADLFMElKVLR-EvlpnevtkpIKVLDFLK--RVEGCYPNTWISFRILLTILVSVASAERSFSKLklIKNYLRSTMSQ 542 thale cress
Q9ZWT4 691 QLRVQLEHfEHVQQLpdfrtlesiSDLCRWLVktRKSNIYPLVFRVVTLVLTLPVSTATTERSFSAMniVKTTLRNKMED 770 common morning-glory
2BW3_A 515 GQQTVDSLLFLNSFY 529 house fly
Q18809 595 EDQTNQKILFLHQNM 609 Caenorhabditis elegans
Q8S7P4 773 KLLNDCLITFIERDV 787 Japanese rice
Q9D102 321 EKLSSLALIAVEQEL 335 house mouse
Q9H5R2 417 EKLTGPALMAVEQEL 431 human
O82185 136 ERLSDLAILSIERAL 150 thale cress
Q9LSK4 591 ERLNGLALISIEQEL 605 thale cress
Q9SN25 689 ERLNALAILSIERDL 703 thale cress
Q9SKI5 543 DRLNGLAILSIERAM 557 thale cress
Q9ZWT4 771 EFLSDCLLVYIEKQI 785 common morning-glory
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