Conserved Protein Domain Family
COMPASS-Shg1

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pfam05205: COMPASS-Shg1 (this model, PSSM-Id:310073 is obsolete and has been replaced by 461586)
COMPASS (Complex proteins associated with Set1p) component shg1
The Shg1 subunit is one of the eight subunits of the COMPASS complex, complex associated with SET1, conserved in yeasts and in other eukaryotes up to humans. It is associated with the region of the Set1 protein that is N-terminal to the C-terminus, ie Set1-560-900. The function of Shg1 seems to be to slightly inhibit histone 3 lysine 4 (H3K4) di- and tri-methylation, and it is a pioneer protein. The COMPASS complex functions to methylate the fourth lysine of Histone 3 and for silencing of genes close to the telomeres of chromosomes.
Statistics
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PSSM-Id: 310073
Aligned: 90 rows
Threshold Bit Score: 51.7965
Created: 18-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6BUS6         23 QLTAVYKKNGSFDQRRKLL-LEDFKKSETHSNLLLKLKLMVENKIKNDP-SILMKNKGKMGALIQGGIINDhmqqktvns 100  Debaryomyces ...
XP_011423566   16 DIIDSLKSKGLFDQFRKEF-VADVDTKPSYQNLKQRVEGYVNRFLSRQTwSPDL-NKNQLRDNLRRQINQSgml------ 87   Pacific oyster
XP_002413564   20 SIVSHLKSRGLFDQLRRDC-LGDVDTKPAYLNLKQRIEGYITKFLAMQTwTPDM-NKNHVRDIMRREINESgm------- 90   black-legged ...
XP_798366      15 RIVDRVKSQGIFDQFRRDC-LADVDTKPAYQNLGTRVEGYVSSFLTDFVwTPDM-NKNQLRNSLRRQINESem------- 85   purple sea ur...
XP_001955649    7 SLIEEVKSQGVFDEFRFNCcLADVDTKPAYQNVRNRVETAVNDFLSKQHwTPDT-NKLQLRERLRKHLIDSdvl------ 79   Drosophila an...
CCD75276       13 HIVDQIKSQGLFDKIRKQC-LEDVDVNSDYQVLQKKVNSFVSSFLQNQSwNPGV-EKLKLREQLRTRLLSTkm------- 83   Schistosoma m...
XP_001635176   25 QIVDHFKRQGNFDELRRDC-LDELDKMESFRQLNQRVESYVATFLSKQDwSDSLP-KNQVRNSLRKHVNESda------- 95   starlet sea a...
XP_015793131    7 KIVNDLKARGVFDEFRKEC-LSAVDTRPAFENLRQKIDGKVKNYLESLTwDASLN-RNQLREKLRRSLTESdn------- 77   two-spotted s...
XP_009015977    9 eVVNKLKKQGLFDQFRKEC-LADVDTKPAYQNLQTRVTGEVSRYLSTVKwKQDIN-KNQLREHLRRHLNELpm------- 79   Helobdella ro...
XP_009172238   11 EIIERLKSQGLFDRIRKHC-LEDIDLDSDYKFLQQRVNSFVSAFLQKQSkPIASE-KLKLRERLRRELSNTsm------- 81   Opisthorchis ...
Q6BUS6        101 kndNSLLSIVDKDIQekiidSPEFHKELKD 130  Debaryomyces hansenii
XP_011423566   88 --tnGVERVIEQLVN------PKILHIIKP 109  Pacific oyster
XP_002413564   91 -lsAGMDHLVDQIVN------PKIYHVFTP 113  black-legged tick
XP_798366      86 -laSGVERVIEQVVD------AQLQQIFLP 108  purple sea urchin
XP_001955649   80 --nkGVDQIVDQVVN------PKVATIFEP 101  Drosophila ananassae
CCD75276       84 -lsCGVDRLVNQAL------SAKMPKNFKN 106  Schistosoma mansoni
XP_001635176   96 -lkTGVDRLVSQALE-------RKRKSFQM 117  starlet sea anemone
XP_015793131   78 -viATIQHLVDQVIA------QKATTYMLS 100  two-spotted spider mite
XP_009015977   80 -ltAGIERVVDQVVK------PKIFQSLKP 102  Helobdella robusta
XP_009172238   82 -ltTGVDRIVKNAVR------TKLPRDFQD 104  Opisthorchis viverrini
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