4TQ0,2DYM


Conserved Protein Domain Family
APG5

?
pfam04106: APG5 (this model, PSSM-Id:309292 is obsolete and has been replaced by 461175)
Click on image for an interactive view with Cn3D
Autophagy protein Apg5
Apg5 is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway.
Statistics
?
PSSM-Id: 309292
Aligned: 155 rows
Threshold Bit Score: 90.6816
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4TQ0_A          93 WHYPIGLLFDLl-----------------------------------------------------A-------SSsaLPW 112 human
86_pfamImport    1 WNLPFGVTFDLnyqdpsmkgelgdd--------------------------------------dsfdlgiqeipppfIPQ 42 
30_pfamImport    1 WHVPAGVLYDLmyild--------------------------------------------------------pntlkLPW 24 
133_pfamImport   1 WHVPIGVLYDIcvpl-----------------------------------------------------------hysTPW 21 
34_pfamImport    1 WHVPTGVLFDLiagvgqeegggakh--------------------------------------geevpwsgpgrlglLPW 42 
91_pfamImport    1 WHLFIGVLYDLmtckskrlkr----------------------------------------------tssaralqsaLPW 34 
Q54GT9          80 WHLPIGVLYDTivgnnncnnsnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnNnniimeqPY----W 155 Dictyostelium...
50_pfamImport    1 WHVPIGVLYDTlvlsksg------------------------------------------------------gvieqpyW 26 
31_pfamImport    1 WHIPIGVLFDMlvatpd--------------------------------------------------------ttasqiW 24 
53_pfamImport    1 WHLPIGVLFDVlvgse----------------------------------------------------------sgtqiW 22 
4TQ0_A         113 NITVHFKSFPEK-DLLHCP------------------SKDAIEAHFMSCMKEADALKHKS-QVINEMQKKDHKQLWMGLQ 172 human
86_pfamImport   43 NIILHYG--PCTisndytpi----------psipgktVLDIAKKSFRFALKESLHIRFDSdTILMQMEAEKQNELWESYK 110
30_pfamImport   25 SLTANFGAFPAD-TVIRCS------------------NEEDAQWNYLNNIKECMYIRFNStSAMMTFSNEDQKELWSAVK 85 
133_pfamImport  22 HIIVHFQSYPDRpDVGRCD------------------HIDVVKRTYFNALKQALLLGYNSvNMLVNLKKEDQDQLWSSVV 83 
34_pfamImport   43 RITVHFQGCPRR-QVFPLE------------------KEADIRRHYTNALKQALFLQSGSsRAGMTLAKENQNRLWQAIK 103
91_pfamImport   35 RIKVHFT--SYHdDLLPLDtsaiqpnsnqqkkvtvkgTDELLGRMFRNSLKASLFMQFGSsKVPLSINKNSHEQLWASIL 112
Q54GT9         156 NIVVHFQSYPDR-ILLRCP------------------NIESVRTYYKNVLKEANFIKQGDiTKINNLNINQSNDLWDGLK 216 Dictyostelium...
50_pfamImport   27 NIVVHFQSYPDK-ILLKCP------------------NIEAVRTYYKNVLKEATFIKQGDiNKFNNLTINQSNDLWDGLK 87 
31_pfamImport   25 NITVHFQSFPEK-VLLRCS------------------NEDAIRTYYKNVLKEANYIKQGDiNKLNNLSINQTNELWDGLK 85 
53_pfamImport   23 NLTVHFQSFPEK-ILLRCP------------------NEESVETYYKNVLKEANYIKQGDiNKLNNLNINQSNELWDGLR 83 
4TQ0_A         173 ND--------RFDQFWAINRKLMEYPaeE-------------------NGFRY--IPFRIYQ----------------T- 206 human
86_pfamImport  111 NL--------NQNTFFSILDQIFQLK--Nh-----------------lQNNKAikLPVRV-------------------- 143
30_pfamImport   86 SQ--------NEQVFCKLFEKIKLGA--Ki------------------ASIDDmvYAIRIYTplkkdsnssvnltddsKk 137
133_pfamImport  84 QA--------RYDLYFSIQNLMFDPT--Kedq--------------ssKKLLK--YPFRIILqgfdrd------------ 125
34_pfamImport  104 SN--------DTKVFHEMDALLGGDR--G--------------------TVRL--VPVRLLTgg---------------- 135
91_pfamImport  113 DN--------NHVMYHEVNKNLQRGL--MsplvsqvdsssrpmraksdSVVAPqlVPVRLLLne---------------- 166
Q54GT9         217 SH--------DYDKFWSVNKKLIPNS--N-------------------KEYKN--IPIRLIIny---------------- 249 Dictyostelium...
50_pfamImport   88 NH--------DYDKFWSVNKKFAPNS--Y-------------------KEYKN--IPIRLIIny---------------- 120
31_pfamImport   86 LH--------DYEKFWSINKMFYPG-----------------------NGYKH--IPYRIIQnn---------------- 116
53_pfamImport   84 QHifpffhvdDYDKFWSINKLFYNVN--Vggs-------------stgIGYKH--IPVRLIQnn---------------- 130
4TQ0_A         207 -TteR-PFIQKLFRpvaad------------------gqlhTLGDLLKEV-CPSA------------------------- 240 human
86_pfamImport  144 -------YIEGYIGriqlshq--------------idsendTLGDFLTKY-FPKIlkqtdtafe---------------- 185
30_pfamImport  138 kD--VlKYKKNMIClkrdq------------------akqlDLQTFLNNHvIPQLtkggyfg------------------ 179
133_pfamImport 126 --sldgvPIQRPVEvpsek-----------------dgrykTLEQVLKPI-LPGIleivesekt---------------- 169
34_pfamImport  136 -----apPSQLPIPaqrpd------------------gtpfTLRDCLRWF-CPGVpwdaeegaeevplsqqqqqqagiaa 191
91_pfamImport  167 -----epARQRPVKherivetksvteilslpddhmeappfiTLGDVLVEW-LPGYfaintttkfae-------------- 226
Q54GT9         250 -----kpPIQELIPvfden------------------lvelTLENLFSRIpYESfsnflnynnnnnnnninnnspp-lsp 305 Dictyostelium...
50_pfamImport  121 -----kpPVQELIPvydgen----------------stteiTLENLFSKIpYDSVsslfnyisnsnntgnlspp------ 173
31_pfamImport  117 -----kaPLQDLISpinen------------------gqetTLESLFSKIafnnsnnsssnnnnnnnn------------ 161
53_pfamImport  131 -----rpYVQNLIApynes------------------gaelTLSDYFSKIpFYSIfiggatepss--------------- 172
4TQ0_A         241 ------------------IDpedgekkN---------------------------------------------QVMIHGI 257 human
86_pfamImport  186 ----------------------------------------------------------------iindnyknfKVICNGI 201
30_pfamImport  180 ------------------------------------------------------------------dcetkidRVVIQGV 193
133_pfamImport 170 -----------------------------------------------------------------valaeksvFIKIQGL 184
34_pfamImport  192 aqpgkgdfgrrdsaeegtVN-------TvdtqgnaaersgveerletdtrviggqqagmlavssddagamslpVVLVQGV 264
91_pfamImport  227 ---------------------------------------------------------------avssgelkrsDVLIQGI 243
Q54GT9         306 nsnnnnnnnnvdnsiensLN-------Qtnvesaepefs-----------------------nllqyikatnaEYKIQGI 355 Dictyostelium...
50_pfamImport  174 lspsdrnsaevdnniensIN-------Qsslppsaeysn------------------------llqfmkacgiKYRIQGI 222
31_pfamImport  162 snnnsnnnnnidtsnetqQS-------Tttlsssstnst-----------------------tllqvlnsgsiRYSIQGI 211
53_pfamImport  173 ---------ssptttntgEL-------Stsssstsmayt-----------------------nllqyikagagKYLIQGV 213
4TQ0_A         258 EPM---LETPLQWLSEHLSYPDNFLHIS 282 human
86_pfamImport  202 VCN---LNMPLLYFYKYFSHYDGFTYLC 226
30_pfamImport  194 EPS---KETEMLWLFENCAHPDGFLYMC 218
133_pfamImport 185 NVP---LGSQMSWLVKHMCHPDYFLYVV 209
34_pfamImport  265 EVP---LDAPITQLWGALRHPDHFLYIV 289
91_pfamImport  244 ELTnkmLQTALIDLWRGLCHPDQYLYIV 271
Q54GT9         356 QPS---LKSSAVWLYEHFGHPDNFLYIV 380 Dictyostelium discoideum
50_pfamImport  223 EPP---LDSSAVWLYEYFSHPDNFIYIT 247
31_pfamImport  212 EPP---LNSSLIWLGDYFSHPDNFLYIV 236
53_pfamImport  214 EPP---LESSFLWLGEYFSHPDNFLYIT 238
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap