Conserved Protein Domain Family
OmpH
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pfam03938: OmpH (this model, PSSM-Id:309164 is obsolete and has been replaced by 461098)
Outer membrane protein (OmpH-like)
This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.
Links
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Statistics
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PSSM-Id: 309164
Aligned: 637 rows
Threshold Bit Score: 33.3126
Created: 18-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q2LVL4        16 LFLCSVSMAGAEE------------KIGFVDVREIMVNSDAGKKASEEFKKTFEKNKTQIQAKETELK-KLREELEkqrS 82  Syntrophus acid...
WP_012536529  10 lllltltSVAAWAdp---------pKIGFVDLDRALRELPEAQAGAASLNKQVEAKQKEMEARRQQID-AFQKTLE---K 76  eubacteria
WP_015707592  10 LFIIGLAGSLHAQql---------tRFAVVDLLRVYTAFFRESRAARELEERSARVQNEIDRMTAEIQ-NLYNSMVdaqT 79  Treponema primitia
WP_013968804  11 VLLLIATMGVSAQql---------tRFAVVDLPKIYTVFFKDSKAVRDFEERSARVQADIDKMNNEIQ-TLQKNRLdavN 80  Treponema caldaria
WP_024268114  13 ILIIFAASGIAAEql---------tTVGVVDITRVYNSFFADSTAVRELENLKEEIQQELDGHVAILR-RLQEQKLdaeS 82  Spirochaeta sp....
WP_014624771  10 GLLLLGSTLAHAEel---------tTVAVVDINRVAMAFFRNSSAVREIERFKTEIQEEVNRLTAEIK-ALQEQKLqaqE 79  Spirochaeta the...
WP_014455587  12 VFLLAVSMPAAAEql---------tTVAILDVSRVYSSFLRDSQAVRNLERAAEEARTEIRRHEQELV-QLREQRVearD 81  Spirochaeta afr...
WP_013626859  10 LLIAALCFSGCGNnsa------dskAVAIVDLDRVLKMTGTDLEIQNAV----QERQTRIRDDLATFQkRLEDAWNtkkA 79  Planctomyces br...
WP_013109475  73 FFAPLLGFSLLAPfstgcnqqpaggAVAVVDLDQVAELTGVTAEIKTKLAAKEQTLNGELLTAQAKLR-QELANRK---T 148 Planctomyces li...
WP_035194395   8 GVVLLLMLTSVVAwad-------plKIGFVDLDRALRELPEAQAGATSLNKQIAAKQKEIEAKRQQVN-IFQKTLErdfP 79  Acidithiobacill...

Q2LVL4        83 IL-------KEAALKEkesaYQKKFHDYQVmVKDAn-EDMQKRDQELSRsm--iPEIMKVISTIAAKEKYTAVFD--I-G 149 Syntrophus acid...
WP_012536529  77 DFphltnaqRQEREAQ----LQGMILNLQQ-FQRQaqDTLNYQRNQILKsi--qDRLVKVVSRIGRAGHYTVILNd-K-S 147 eubacteria
WP_015707592  80 RGd-------eERSLRlqseIYRKQDFLREyHQVKt-AELEDQKRKLAQsnsfmEQISDEIRFIAESEGYSMVLNqkEnT 151 Treponema primitia
WP_013968804  81 AGd-------qQKVLSldneIYKKTEYLKEyYRIKt-AELEEQRKKLTQsdsflKQVYDEIRIVAESDGYSMVLNlkEsS 152 Treponema caldaria
WP_024268114  83 DGd-------eDEALRldeeIYEKQQYIQDfQRIKq-RQLYDRQQRLLNsetflSELQSAISFVAEANGFTVVVSs-NdD 153 Spirochaeta sp....
WP_014624771  80 AGn-------eERALAldqqIYQKTQYLRDyYRVKt-QQLEERQRKLTEsstflQELKNALEYVAETHGFSVIFKs-TdP 150 Spirochaeta the...
WP_014455587  82 NDn-------nRRVLEldeeIQEKQQFIEElRRVRs-SQLERQQRDLMSsdaflNEIQQAVRFVSESQGYTVVLNa-AdP 152 Spirochaeta afr...
WP_013626859  80 EFge---epSEEQQNQlqqfLIRLNQESQQaQSQAq-ANVSQFRQELYQtf--qDQVSPISLEVAKEQGFSIVFGq-N-P 151 Planctomyces br...
WP_013109475 149 AAgelpsreEAQKLQQ----FEASANRALAsARNTakTLLDQERLKLVAqf--rEQIKPVMAEIAKEKGYSVIIPknD-G 221 Planctomyces li...
WP_035194395  80 HLtn---aqRQEREAR----LQSMILNFQQ-FQRQaqDGLNYQRNQILKni--qDQLVKVVSRIGRAGHYTVILN--D-K 146 Acidithiobacill...

Q2LVL4       150 TALFFVKEKDLTKQVLAEF 168 Syntrophus aciditrophicus SB
WP_012536529 148 -VLYVNGAIDITPQVVAAM 165 eubacteria
WP_015707592 152 GILWFSPSVDITDKLITNL 170 Treponema primitia
WP_013968804 153 GILWYSPTVDITDKVINNL 171 Treponema caldaria
WP_024268114 154 KLLWWSQEVDITNLVLERL 172 Spirochaeta sp. L21-RPul-D2
WP_014624771 151 DLLWWHKEVDITDLVIERL 169 Spirochaeta thermophila
WP_014455587 153 NLQWWASEVDITDRVIERL 171 Spirochaeta africana
WP_013626859 152 SILAFDTSIDITDAVVERM 170 Planctomyces brasiliensis
WP_013109475 222 LLLAISPGVEITEAVSAKI 240 Planctomyces limnophilus
WP_035194395 147 SVLYVNGAIDITSQVVAAM 165 Acidithiobacillus ferrivorans
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