1KA8


Conserved Protein Domain Family
Pox_D5
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pfam03288: Pox_D5 (this model, PSSM-Id:308746 is obsolete and has been replaced by 367437)
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Poxvirus D5 protein-like
This family includes D5 from Poxviruses which is necessary for viral DNA replication, and is a nucleic acid independent nucleoside triphosphatase. Members of this family are also found outside of poxviruses. This domain is a DNA-binding winged HTH domain.
Links
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Statistics
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PSSM-Id: 308746
Aligned: 38 rows
Threshold Bit Score: 56.9718
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1KA8_A         1 DADPTFDFIGYLETLPqtsgmy-mgnasIIPRNYRKYLYHAYLAYMEANGYRN-VLSLKMFGLGLPVMLKEyglN----- 73  Enterobacteria ...
Q99XM4       439 EMNPVIDFVSKFFTDEl-----------TSEFIPNSFVYHVWKGFLEYYDIKQ-IKSERGLHKEIKSNLPE---G----- 498 Streptococcus p...
Q9X9M4       441 EMNPVADFVDRFFNDEv----------iKCNYVPNGYVFECFKAYCEKNQNRNyFLNSRTLHKQIKKILPK---T----- 502 Streptococcus t...
A0AI02       675 DNDPILDYYERIFKEY------------KSTRIPLYVVYEFYKYFCESNNLKP--VGDRSFYKRFGEILSE---Eg---- 733 Listeria welshi...
Q82ZU9       690 ENDPLVDFRETVFKPL------------GINKIPFYMVYSQYKEFCKENNFKP--LSKIKFSKQFTYLLGD---S----- 747 Enterococcus fa...
Q93RN5        47 HSDPLYRFCGYLVSVNdmtgmk-mgnknISPRAPRLYLYHAYLSFMEAHGFER-PLTLTKFGESIPKIMLEyrkE----- 119 Xenorhabdus nem...
Q74QA8       652 DADPLYGFCAHIVELGeavgmy-mgtlaISPHAPRIYLYHAYLAYMEAYGHQR-SLSLTKFGKDFPKVMEEfgaE----- 724 Yersinia pestis
WP_045898799  22 DADPTFDFCGYLEALPepegmy-ignanIIPRQPRLYLYHAYLAYMEAHGYKN-TLSLTMFGKGLPAMLKEyglS----- 94  Enterobacter ho...
WP_062623884 502 QSDPLTDFFEYLYTTEntdglyigtgntLGHDKIRTHLYPAYLAFVKAKNVLE--LGLNTFVVGIEQAVKQ---Hgnkhd 576 Mannheimia haem...
WP_012123979 669 QSDPLVDFCGYLMPLStpnglf-mgnanIRPINPKRYLYHAYLSFMESRGHQH-PLSLTAFGQAVPQTLKEyerV----- 741 Cronobacter sak...

1KA8_A        74 YEKRHTK-----------------QGIQTNLTLKEESYGDWLP 99  Enterobacteria phage P4
Q99XM4       499 FEAGQKVipvg---------rqlhTGFYPKEDLPLFASASYAN 532 Streptococcus pyogenes serotype M1
Q9X9M4       503 FRPKEVTikkg---------qkfyEEFNPHLVSNPWHFDAYDN 536 Streptococcus thermophilus
A0AI02       734 WEKGKHKlsgkfdpadtptgihpyRYQQPKDSVTYVCFIKNNT 776 Listeria welshimeri serovar 6b str. SLCC5334
Q82ZU9       748 WINKKIK-------------------YSVNEIEKIKALGDFFS 771 Enterococcus faecalis
Q93RN5       120 YRKVRTK-----------------KGYSYNVELSEEA-EEWLP 144 Xenorhabdus nematophila
Q74QA8       725 YKKARTD-----------------KGFRYNMDLSDTA-NDWLP 749 Yersinia pestis
WP_045898799  95 YEKRRKN-----------------QGIQTNLALREESNADWLP 120 Enterobacter hormaechei
WP_062623884 577 FTKRKTN-----------------KGQRTNVHFKNFD--DFQS 600 Mannheimia haemolytica
WP_012123979 742 LLKRRTS-----------------NGVQTNLTLHEDSEADWLP 767 Cronobacter sakazakii
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