5DMN


Conserved Protein Domain Family
S-methyl_trans

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pfam02574: S-methyl_trans (this model, PSSM-Id:308273 is obsolete and has been replaced by 460598)
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Homocysteine S-methyltransferase
This is a family of related homocysteine S-methyltransferases enzymes: 5-methyltetrahydrofolate--homocysteine S-methyltransferases also known EC:2.1.1.13; Betaine--homocysteine S-methyltransferase (vitamin B12 dependent), EC:2.1.1.5; and Homocysteine S-methyltransferase, EC:2.1.1.10,.
Statistics
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PSSM-Id: 308273
Aligned: 766 rows
Threshold Bit Score: 93.7541
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5DMN_A          17 LL---------------------LDGAMATEL-EArgcnladslwsakvlveNP--------------E---L------- 50  Escherichia c...
531_pfamImport   1 KI---------------------LDGAVGSLLqQK-----------------YPefyeqrtwmnrilkEkpeK------- 35 
492_pfamImport   1 ------------------------EGGIETSL----------------------------------------Iyrknidi 16 
469_pfamImport   1 -----------------------MEGALGERL----------------------------------------Kreysvef 17 
385_pfamImport   1 FV---------------------ADGGLETEL----------------------------------------Ifhhgidl 19 
16_pfamImport    1 -V---------------------SDGGMETTL----------------------------------------Iyhhgrel 18 
110_pfamImport   1 -I---------------------TDGGIETTL----------------------------------------Ifreglel 18 
76_pfamImport    1 -----------------------TDGGLETTL----------------------------------------Ifhegidl 17 
129_pfamImport   1 ------------------------DGGLETDL----------------------------------------Lfnrgidl 16 
P74718          29 IIandklavkmtnlphqceqiflLDGGLETEM----------------------------------------Ifnrgfdl 68  Synechocystis...
5DMN_A          51 ------------------IREVHLDYYR-AGAQ----CAITASYQATpagfaarG----L-DeaQSK-A------LIGKS 95  Escherichia c...
531_pfamImport  36 ------------------LYDLHLEYCK-QGAD----IITSFTFKTNpi----------acQslEESkK------LVQIA 76 
492_pfamImport  17 pgfst-lpllgteegrktILSIYQDYVKiALAHstgiVLETRTWRGSp------AwsstIgLsvTQIvD------LNRIA 83 
469_pfamImport  18 ddkvamaglvynthsreaMESIFKEYVTiAEKYklpfIATTPTRRAN------------L----EHVmQsefdekIIEDN 81 
385_pfamImport  20 pafaa-fplldhpstrdlLRRYYDGYLAvARRHgagfVVSTPTWRANp------DwaaqLgYspERLdA------VNRAA 86 
16_pfamImport   19 phfaa-ftlmddaegrrlLTDYYRRYIDiALRHrrglLLETPTWRASa------DwgarLgYdaAALaR------VNRDS 85 
110_pfamImport  19 pefaa-fdlfksasgyqaLQKYFRTYARmASTYavgcILESATWRANp------DwgtkLgYdrDALtA------VNGQA 85 
76_pfamImport   18 pdfaa-fdllkdnqgyeaLYEYFQTYAQlAQTYevglILESATWRANp------DwgtkLgYdaAELaA------VNRNA 84 
129_pfamImport  17 plfss-vvllatlegreaLETYYRPYLElAHRHsagfILESATWRASp------DwaapLgLhqCGLdQ------LNVAA 83 
P74718          69 pafaa-htllsdplgreaLKNYFHGFLDlAKEKqfgfLIDAPTWRAQp------FfaeeLgVslEEIrQ------ANFRA 135 Synechocystis...
5DMN_A          96 VELARKAR----EAYlaenpqagtllVAGSVGPYGAYLADgseyrgdyhCSVEAFQAFHRPRVEalLDAGADLLACETLP 171 Escherichia c...
531_pfamImport  77 VKECQKLKeiykDIQ-----------IFGSNSPAEDCYQKer------tLTKDELIYNHKNHIQflYDCQVDCIFNETMS 139
492_pfamImport  84 VRILRDLR----HKAetps---tpivISGALGPLQDAYQDst-----grFTFSQAREHYGAQIRvfAEEGVDMSSIMTVT 151
469_pfamImport  82 VRFLQKIK----TYAstd------mfVGGLMGCKGDAYKAte------iLSIQEAHKLHSWQANlfKNSGVDFLFAGIMP 145
385_pfamImport  87 VQLAEEVR----AAAaadg---ltavVSGCMGPRGDGYDPsd------aMTVEDAERYHAVQIAtfADTTADQVAAMTIT 153
16_pfamImport   86 VALLDALR----ATHqrag---tpmvISGAIGPRGDGYVAda------gMSATEAADYHGEQIAtlASTRCDLVTAFTLN 152
110_pfamImport  86 IALLHEIR----HEFeteq---srlvISGCLGPRGDGYIPad------aMSETEAEFYHRPQIEtfRQAGADLVTAITMN 152
76_pfamImport   85 IALLHTIR----QQYetea---srmvISGCIGPRGDGYQVdt------aMTPAEAQVYHLPQIEafKEAEADMVSAVTMT 151
129_pfamImport  84 VELLHRLR----SKSatdp---leivVSGCVGPRGDGYDPgq------iMNVAEAANYHGHQVRvlASAGVDMLSALTMT 150
P74718         136 VEFARALK----QAYvnei---qpllINGLIGPCGDAYGGeh------fSNAEAAQVYHRQQISwlAEAGVDLLGAFTLT 202 Synechocystis...
5DMN_A         172 NFSEIEALa--eLLtaypraRAWFSFTLrDSe-hLsDGTPLRD-VVALLAGypqVVA--LGINCIA-LENTTAALQHLhg 244 Escherichia c...
531_pfamImport 140 QLDELIIVcqicQDmn---iPYIISIYF-DNnlkIlSGESVDDcVDTLLNKy-kFKPicLSFNCVQkKDLLNLFLQSKk- 213
492_pfamImport 152 NLDEATAAvsvaREyn---lPILVSFSIetd-grLrGGRTLEDaIREVDRVt-dNYTtyFGVNCAH-PRHVMIALRGMse 225
469_pfamImport 146 ALSEAIGMakamENtg---lAYIISFMIrnn-grLiDGTTIHDaILSIDNEt-lRKPicYMANCVH-PIVLKKALSCScn 219
385_pfamImport 154 NAPEAIGIvraaAAad---iPAVISFTVetd-grLpTGQPLHDaIDQVDAEt-gGSAayFMVNCAH-PTHFSDALEHDgp 227
16_pfamImport  153 YVDEAIGIvraaQHet---mPVVISFTLetd-grLpSGQALGDaIRETDAAt-aAGAtyYMINCAH-PTHFDHVLDGAgd 226
110_pfamImport 153 YVEEAIGIargaKTvg---iPVVISFTVetd-gkLpTGQPLKEaIAQVDKAt-dAAPayYMLNCAH-PTHFMDELRTGet 226
76_pfamImport  152 YTEEAIGItraaHLvg---mPVVISFTVetd-gkLpTGQGLKDaIAQVDAAt-gNGPiyYMINCAH-PSHFEQIFATNep 225
129_pfamImport 151 NINEATGItlaaAEvg---lPVSVSFTVetd-grLpTGDSLMDaVTAVDEAt-nDYAayFMVNCAH-PDHFAAVLDEPaa 224
P74718         203 SVNEAIGIvrasQEfs---lPVSISFTVetd-grLpTGTALSEaIAIVDEAt-nQGAayFMVNCAH-PDHFRAVIREEaw 276 Synechocystis...
5DMN_A         245 lt------vlpLv----------------VYPN-------------S---GEh------------YDAVSKTWH----Hh 270 Escherichia c...
531_pfamImport 214 -----------IfqqksskninsenikygFYINc---------------gGEdytc-----ndfnYQIQPEELPifyqQ- 261
492_pfamImport 226 dvm---------------------srigsIRGNsslkchdeldnsgVldrGD-----------------IPVWDqefnG- 266
469_pfamImport 220 etklvkerfrgI------------------QANtsqlspeeldnsdDlktSDsislacnmmelndY-LTPK--------- 271
385_pfamImport 228 wrq----------------------rlvgLRANasskshaeldestEldeGD-----------------PEDLGarhaA- 267
16_pfamImport  227 wrh----------------------rirgLRANascrshaeldaatEldaGD-----------------PIDLGaryrA- 266
110_pfamImport 227 wve----------------------rirgIRANastkshaelneseTldeGN-----------------PAELGslyqQ- 266
76_pfamImport  226 wlt----------------------rihgLRANastkshaeldeavDlddGN-----------------PQELGqqylN- 265
129_pfamImport 225 wtr----------------------rirgVRANasrcshkeldamtEldaGD-----------------PLELGqlyrK- 264
P74718         277 ls-----------------------rlggFRCNpsrrshaqldqanFldiGN-----------------PVELAhsywT- 315 Synechocystis...
5DMN_A         271 gehcaqladylpqWQ-----AAG--ARLIGGCCRTTPADIAALKA 308 Escherichia coli K-12
531_pfamImport 262 -------------LIdldiiEKQdiLF-LGSCCMSTPGHTLQLSK 292
492_pfamImport 267 -------------LL-----NILlgLKVIGGCCGTDEEHVETIAK 293
469_pfamImport 272 ---------------------------IFGGCCGTDNTHIEEIAK 289
385_pfamImport 268 -------------LR-----DRLpnVTVLGGCCGTDARHVAAICA 294
16_pfamImport  267 -------------LR-----PQLpgLAVIGGCCGTDHRHVEAICA 293
110_pfamImport 267 -------------LR-----EHLphLNVLGGCCGTDDRHIEAICK 293
76_pfamImport  266 -------------LS-----DALpnLNVLGGCCGTDHRHIEAICK 292
129_pfamImport 265 -------------LL-----HEHpqITVLGGCCGTDLRHVTAIAE 291
P74718         316 -------------LK-----QKVpsANVFGACCGSDLRHIREIAK 342 Synechocystis sp. PCC 6803
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