1X2L,2CSF,1WIZ,2D5V,1WH8,1WH6


Conserved Protein Domain Family
CUT
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pfam02376: CUT (this model, PSSM-Id:308148 is obsolete and has been replaced by 460543)
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CUT domain
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein.
Links
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Statistics
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PSSM-Id: 308148
Aligned: 43 rows
Threshold Bit Score: 81.8709
Created: 16-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1X2L_A         13 EEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGL---SQGSVSEILARPKPWRKLTVkgkepfikMKQFLSDEQNVLAL 89   human
Q9BL02        596 NGHPLNTTEIASHCKRLMIAYNIGQRLFAKHVMNQvvkSQGSLSELLSKPRHWNKLTDkgreafrrIYGWISDDEAINLL 675  Caenorhabditi...
XP_011959903   97 MSPELDTYGITKRVKEVLTDNNLGQRLFGETILGL---TQGSVSDLLARPKPWHKLSLkgrepfvrMQLWLNDPNNVEKL 173  sheep
XP_005171778  408 qnLELDTFSITQRVKKTLIVHNIGQRVFGEEVLGL---TQSSVSELLSHPKPWTKLSLkgkenfirMHLWLRDPHSVQKL 484  zebrafish
XP_016768223 1192 lTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGL---SQGSVSELLSKPKPWHMLSIkgrepfirMQLWLSDAHNVDRL 1268 honey bee
XP_009051593   10 MTSEIDTLDLTSRVKDVLQFHNLGQKLFGEAVLGL---SQGSVSELLSKPKPWHMLSIkgrepfikMHLWLSDPQNIDRL 86   owl limpet
XP_015909594    3 hYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGL---SQGSVSDLLARPKPWHMLTQkgrepfirMKMFLEDENAVHKL 79   common house ...
XP_003377815  308 RFGRINTEKLVQRVKEHLLQYSISQRVFGEQVLGL---SQGSVSDLLARPKAWHMLTQkgrepfirMHAFLEDNELLKKL 384  Trichinella s...
XP_002641550 1018 geEILDSQKIVSRVKEVLEEHGISPRVFGDEYLNC---SPTMCADLMIRTKPFQLSRPtekvmyfrMRNFLNDPSSIPNL 1094 Caenorhabditi...
1WH8_A         23 MSPELDTYSITKRVKEVLTDNNLGQRLFGESILGL---TQGSVSDLLSRPKPWHKLSLkgrepfvrMQLWLNDPHNVEKL 99   human

1X2L_A         90 R 90   human
Q9BL02        676 C 676  Caenorhabditis elegans
XP_011959903  174 M 174  sheep
XP_005171778  485 N 485  zebrafish
XP_016768223 1269 Q 1269 honey bee
XP_009051593   87 K 87   owl limpet
XP_015909594   80 V 80   common house spider
XP_003377815  385 I 385  Trichinella spiralis
XP_002641550 1095 I 1095 Caenorhabditis briggsae
1WH8_A        100 r 100  human
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