Conserved Protein Domain Family
Clathrin_lg_ch

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pfam01086: Clathrin_lg_ch (this model, PSSM-Id:307299 is obsolete and has been replaced by 460056)
Clathrin light chain
Statistics
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PSSM-Id: 307299
Aligned: 91 rows
Threshold Bit Score: 123.57
Created: 15-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2GXM9         1 MaDrFPSLDDFDSGAq-TdvkdtsDVPSASNFLEREKAILG-------------------D--DA--TqfATVEDAEFde 56  Chaetomium glob...
XP_002119976   1 MaDlFDGDFMEPAAAptTdtsaavEEDPAAAFLAQQQDEIAgl----------------eN--EVlgGnePTVNGFGEpg 62  vase tunicate
XP_002407539   1 MaD----FDNFEANF--Dgpp-aaEEDPAAEFLAREQDVLA-----------------------------GLEDDNDNfg 44  black-legged tick
XP_002598367   1 MaDgLGDFEDQPAqq-------qqEEDPAAAFLAREQDELA-----------------------------GIEDDDVAgs 44  Florida lancelet
CBY09957       1 MdDfFNAAPENQAPVaea----pqVADPAADFLGEDVAAVA-------------------DinEA--PeeLTVDSESPvd 55  Oikopleura dioica
XP_004737612   1 MaDdFGFFsssesg-----apeaaEEDPAAAFLAQQESEIAgi----------------eN--D-----------EGFga 46  domestic ferret
NP_001025780   1 MaDdFGFFssse--------gagaEEDPAAAFLAQQESEIAgi----------------eN--D-----------EGFgp 43  chicken
XP_796327      3 DmAeFDDLQapaaen----pppatEEDPAAAFLAREQDELAgi----------------eD--D------------DFgi 48  purple sea urchin
XP_011447728   1 MsE-FDAFDsepp-------aqntEEDPAAAFLAREQSELAgl----------------eD--DN--VpqDNGGGEQFdm 52  Pacific oyster
EFX72973      33 TmDaFGDDFtgvs--------evaDVDPAAEFLAREHDQLAgledlipevsqpehvetiqD--Df-----MTENAFEVq- 96  common water flea
Q2GXM9        57 gddd-----------------------llgggGGVSSPGNNAAF---ESQ------FPDL-S-----S-----Pneg--- 90  Chaetomium glob...
XP_002119976  63 eqva------------------------davpanDNLFDMPDNY---GEQ-------PVI-T-----NgglefEepa--- 99  vase tunicate
XP_002407539  45 vnva----------------------epladgPTNDIAAEFGEI---QMN------------------------------ 69  black-legged tick
XP_002598367  45 qeet----------------------paapaqVPSAMDDNLDFL---SGG------GGDS-G-----S-----Gaadweg 82  Florida lancelet
CBY09957      56 lagef--------------------esipaaaEVMEEDAMRGML---SSG------ATDIpE-----T-----Rmdp--- 93  Oikopleura dioica
XP_004737612  47 pagshgglaqpg------pasgagsedlgttvNG-------DVFq--EAngp-adgYAAI-A-----Q-----Adr---- 95  domestic ferret
NP_001025780  44 tdgdsasapagqa----appetagfqnggatvNG-------DVFq--ESngp-tdaYAAI-A-----K-----Adr---- 94  chicken
XP_796327     49 gsdpaqtvpdatpatqqqddldplagmgggmgGGMDSETPADDL---QTngp-sdlYSAI-S-----S-----Adn---- 109 purple sea urchin
XP_011447728  53 fddg-----------------------epqmmNGAPDFMGENQFeesQSngp-sdaYSAI-S-----S-----Vdk---- 93  Pacific oyster
EFX72973      97 -------------------------------aSEVAVNYELDAFsevEVDnglsnqLTGM-GlkengY-----Sapqm-- 137 common water flea
Q2GXM9        91 vaPGGTITgGPSVSYnSGY---QPHAEDEEEPEVIKEWREKRDAQIAKRAEQFAQQREETVREAQQNIDDFYENYNNKKE 167 Chaetomium glob...
XP_002119976 100 epEQMDPS-QAYAAIaVAD---ARLEELRTEPEKIRVWREENTKLLAEKDRESERKQQEWLAQARKELEDWDRNRLEQVE 175 vase tunicate
XP_002407539  70 ----GPSE-MLANNVnDTS---PRPTPVREEPEKIKKWREEQAKMLEIKDVEEEKKKDELRAAAKKELDEWYARYQELIE 141 black-legged tick
XP_002598367  83 eqQNGDIF-GADQGGpQSNgpvPTPAPRREEPEKIRKWREEQKAMLEKKDAEAERLREEWKKEAADELRKWYAQREEQLE 161 Florida lancelet
CBY09957      94 sqLVNSMN-AADE----------RIAQLNSESESVRKWREDNEKRIVETDAKETSDLEEWKSTAKSQIEEFYKTYGAENE 162 Oikopleura dioica
XP_004737612  96 ---------------------------lTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVE 148 domestic ferret
NP_001025780  95 ---------------------------lTQEPESIRKWREEQKKRLEELDAASKVTEQEWREKAKKDLEEWNLRQNEQME 147 chicken
XP_796327    110 ---------------------------rANEPEKIRLWREEQKEILEKKDEEADELEVEWKVSAKKEISDWYARRDEQGV 162 purple sea urchin
XP_011447728  94 ---------------------------eRAEPEKLRIWREEQKMRLEKKDAEEAQKKEAWREAAKKELDDWYKHHNEQVQ 146 Pacific oyster
EFX72973     138 -----------------------tssIPREEPEKIRKWREEQKLRLEKKDEEEERKKQEMKEAARKELEDWYKHHKETIE 194 common water flea
Q2GXM9       168 KTIAQTR----KDAEQFLANREDT-----------------------TSGGTSWERIAKLVDVSGKGAkggAAGSGKERF 220 Chaetomium glob...
XP_002119976 176 KTKESNR----TAEEQFLKDRDQA-----------------------AP-GSEWERVSKLCEFNPKST---KSTKDVTRM 224 vase tunicate
XP_002407539 142 KSKQANR----NAEKEWVCERDAA-----------------------NAEGREWEEIAKLCDFNPKST---RNSKDTSRM 191 black-legged tick
XP_002598367 162 KTKASNR----VANKELLKQLEDDalathtrrsrtsaeeafreevaeSNPGQEWERVARMCDFNPKSSk---gSKDTGRM 234 Florida lancelet
CBY09957     163 KRKNQNR----ISTASKPPSLDDP-----------------------K---IAWQQIGDFIDFNASRQ---AKETDKDRM 209 Oikopleura dioica
XP_004737612 149 KNKINNR----ASEEAFVKESKEE-----------------------TP-GTEWEKVAQLCDFNPKSS---KQCKDVSRL 197 domestic ferret
NP_001025780 148 KNRANNR----ASEEAFLKESKEE-----------------------TP-GSEWEKVAQLCDFNPKSS---KQSKDVSRM 196 chicken
XP_796327    163 KAKASNR----AAEEAFIQERDEI-----------------------TP-GQEWERIARLCDFNPKNN---KNLKDITRF 211 purple sea urchin
XP_011447728 147 KTRETNR----TAEEAFKKDRDTT-----------------------QP-GGEWEKICRICEFNPKNS---KNTKDVSRL 195 Pacific oyster
EFX72973     195 KTRSANReaaiTAEKELIGTPTEM-----------------------EP-GQEWERIAKLCDFNPKAS---RNSKDVSRM 247 common water flea
Q2GXM9       221 RELLVSLRKDEKAPG 235 Chaetomium globosum CBS 148.51
XP_002119976 225 RSTLLHLKQNprpis 239 vase tunicate
XP_002407539 192 RSIILQLKQTPLAat 206 black-legged tick
XP_002598367 235 RSILLHLKQeglqr- 248 Florida lancelet
CBY09957     210 KSLLFKLKtsppvka 224 Oikopleura dioica
XP_004737612 198 RSVLMSLKQT---PL 209 domestic ferret
NP_001025780 197 RSVLISLKQT---PL 208 chicken
XP_796327    212 RSILLHLKQSGVQPS 226 purple sea urchin
XP_011447728 196 RSILLQLKQT---PL 207 Pacific oyster
EFX72973     248 RSIILQLKQN---PS 259 common water flea
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