1TIS,3UWL,2AAZ,3I3R,3KJS,3KGB,5BY6


Conserved Protein Domain Family
Thymidylat_synt

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pfam00303: Thymidylat_synt (this model, PSSM-Id:306750 is obsolete and has been replaced by 459753)
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Thymidylate synthase
This is a family of proteins that are flavin-dependent thymidylate synthases.
Statistics
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PSSM-Id: 306750
Aligned: 550 rows
Threshold Bit Score: 204.168
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TIS_A           2 KQYQDLIKDIFENGYETDD-RTGTGTIALFGSKLRWDLTKG-FPAVTTKKLAWKACIAELIWFLSGSTNVNDLRliqhds 79  Enterobacteri...
Q87SA0           2 KQYLDLCQRIVDQGVWVENeRTGKRCLTVINADLTYDVANNqFPLVTTRKSFWKAAVAELLGYIRGYDNAEDFR------ 75  Vibrio paraha...
Q07YY3           2 KQYLDLCKRIVDEGEWVNNaRTNKKCLTVINADLVYDVGNNqFPLVTTRKSFWKSAIAEILGYLRGYQNAADFR------ 75  Shewanella fr...
174_pfamImport   1 KQYLDLCQRIIDEGVWVENeRTGKRCLTVINADLTYDVSSGeFPLVTTRKSYWKSAIAEIIGYLRGYDNAADFR------ 74 
Q15P51           2 KQYLDLCQRIVDDGKWVNNeRTGKKCLTVINADLTYNVGNGeFPLVTTRKSFYKSAIAEMIGYIRGYDNAADFR------ 75  Pseudoalterom...
282_pfamImport   1 KQYLDLCNRIVSEGKWVANeRTGKHCLTVINADLTYDVEKGeFPLVTTRRSYWKAAIAELLGYIRGYSNAADFR------ 74 
385_pfamImport   1 SQYEDLCKRVIDEGIWIENdRTGKRCLTVINADLEYDLTANeFPLVTTRKAFWKSAIAEMLGYLRGYDNAADFR------ 74 
272_pfamImport   1 EQYLDIAKRILEEGKWIENkRTGKRCLTIINADFTYHVDKNeFPLVTTRKAFWKAAIAEMLGYLRGYDSAAQFR------ 74 
92_pfamImport    1 KQYIDLCRKIIHEGCWIKNnRTKTRCLTIINADLEYDVENNqFPLITTRKISYKSAISEMIGHIRGYRSAKQFR------ 74 
Q5R064           2 KQYLQLCQRIVDEGVWVKNeRTGINCLTVINADLEYDVANNqFPLITTRKSYYKSAIAELLGYLRGYNSAAQFR------ 75  Idiomarina lo...
1TIS_A          80 lIQGKTVWDenyenqakdlGY---HS----GELGPIYGKQWRDFG------------------------G---------- 118 Enterobacteri...
Q87SA0          76 -KLGTKTWDanan---lndAWlnnPYrkgeDDMGRVYGVQGRAWAkpd-------------------ggH---------- 122 Vibrio paraha...
Q07YY3          76 -ALGTKTWDanan---enqAWldnPNrkgpDDMGLIYGALGRAFPkpd-------------------ggH---------- 122 Shewanella fr...
174_pfamImport  75 -ALGTKTWDanan---lneSWlanPHrkgtDDCGFIYGKVARAFPkpd-------------------ggE---------- 121
Q15P51          76 -KIGTSTWDanan---qnqAWldnPHrkgeDDCGLIYGKIGRNFPkpd-------------------ggS---------- 122 Pseudoalterom...
282_pfamImport  75 -QLGTKSWDanan---enaQWlanPYrkgeDDMGLVYGAVGRNFPkpd-------------------ggS---------- 121
385_pfamImport  75 -KLGTKTWDanan---qneAWlnnTHrngeDDMGRVYGVQGRKWAkpd-------------------ggF---------- 121
272_pfamImport  75 -AIGCNTWNanan---entDWlanPNrkgeDDMGRVYGVQGRQ-LkvspteaqydlllslndsgdkegvKtlinelrknt 149
92_pfamImport   75 -DLGCNVWEanan---qnkSWlsnPYrkgrDDLGRIYGVQGRSWKkhd-------------------gsH---------- 121
Q5R064          76 -DIGCKTWDanan---enqAWlnnPNrkgeDDMGRVYGVQGRSWQkpd-------------------gsH---------- 122 Idiomarina lo...
1TIS_A         119 VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKyMALPPCHMFYQFNVrngyLDLQWYQRSVDVFLGLPFNIASYATLVHIV 198 Enterobacteri...
Q87SA0         123 IDQLRKIVDDLTRGVDDRGEILNFYNPGEFHmGCLRPCMYSHHFSLlddtLYLNSTQRSCDVPLGLNFNMVQVYVFLAIM 202 Vibrio paraha...
Q07YY3         123 VDLLQQIVDDLSNGIDNRGEILTFYHPGAFDlGCLRPCMYEHHFSLlgdtLYLNSTQRSCDVPLGLNFNMVQVYVLLALM 202 Shewanella fr...
174_pfamImport 122 VDLVKKVVNNLSKGIDDRSEIITFYHPGAFHlGCLRPCMYSHHFSIlgdtLYLNSTQRSCDVPLGLNFNMVQCYFLLAIM 201
Q15P51         123 IDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHmGCLRPCMYSHHFSLlddtLYLNSTQRSCDVPLGLNFNMVQVYFLLAIV 202 Pseudoalterom...
282_pfamImport 122 VDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHmGCLRPCLHSHHFSLldgtLYLNSTQRSADVPLGLNWNMIQCYTFLALM 201
385_pfamImport 122 VDQYKKIIDHLSKGIDDRGEILNFYNPGEFHmGCLRPCMYSHHFSLlgdsLYLNSTQRSCDVPLGLVFNQIQVAWLLQIT 201
272_pfamImport 150 FDQLRKVYDNLKKGIDDRGEIISFWNPGEFNqGCLRPCMFMHHFSVldgtLYLNSYQRSCDYALGYVFNAPQCYFLLAIM 229
92_pfamImport  122 LDQLRKVIQHLKDGIDDRAEIITFYNPGEIEmGCLIPCMHTHTFSIldkkLYLTSYQRSCDVPLGLSFNQIQCFILLALV 201
Q5R064         123 LDQLKKVINNLSKGIDDRGEIVTFYNPGEFElGCLRPCMHTHNFSLlgdtLYLTSYQRSCDVPLGLNFNQIQCFALLALV 202 Idiomarina lo...
1TIS_A         199 AKMCNLIPGDLIFSGGNTHIYMNHVEQC-KEILRREPKELCELVI-----SglpykfrylstkeqlkyVLKLR----PKD 268 Enterobacteri...
Q87SA0         203 AQITGKKPGQAFHKIVNAHIYEDQLELMrDVQLKREPLQAPTFHInpeikS-----------------LEDLEtwvtLDD 265 Vibrio paraha...
Q07YY3         203 AQITGHKPGKAYHKIVNAHIYEDQLEPMrDVQLAREPFASPKLIInpkikT-----------------LKDIEtwvtLDD 265 Shewanella fr...
174_pfamImport 202 AQITGLKAGKVFHKIVNAHIYEDQYELMrDVQLKRSPLKSPTFHInpeikS-----------------LEDLEtwvtLDD 264
Q15P51         203 AQITGKKAGMAYHKIVNAHIYEDQLELMrDVQLKREPLGMPKLIInpdikS-----------------LEDLEtwvtMDD 265 Pseudoalterom...
282_pfamImport 202 AQITGHKAGQAFHKIVNAHIYEDQLELMrDVQLKREPLNAPKLIInpdikS-----------------LEDLEtwvsLDD 264
385_pfamImport 202 AQITGLKAGKAFHKIVNAHIYEDQVELMkD-QIKREPYAAPKLIInpeikS-----------------LEDLEtwvtVDD 263
272_pfamImport 230 AQITGLKCGKVYHKVVNLHLYEDQLELMrDVQIARKPFASPKLHInpdikT-----------------LDDLMtwvtTDD 292
92_pfamImport  202 AQITNYKPGKVYHKIVNAHIYENQLSLMrDVQLKRSPYPLSKLIInpkikK-----------------LEDIEnwvsSDD 264
Q5R064         203 AQITGHKPGKAYHKIVNAHIYENQLELMrDVQLKREPFPSPQLHInpeikS-----------------LEDIEtwvsKDD 265 Idiomarina lo...
1TIS_A         269 FVLNNYVSHPPIKGKMAV 286 Enterobacteria phage T4
Q87SA0         266 FWVEGYEHHDPIRYPFSV 283 Vibrio parahaemolyticus RIMD 2210633
Q07YY3         266 FSVEDYQHHDAIKYPFAV 283 Shewanella frigidimarina NCIMB 400
174_pfamImport 265 FKVEGYEYHEPIAYPFSV 282
Q15P51         266 FSIEGYAHHPAIKYPFSV 283 Pseudoalteromonas atlantica T6c
282_pfamImport 265 FKVEGYEYHPAIQYPFSV 282
385_pfamImport 264 FEVVGYQHHEPIKYPFSV 281
272_pfamImport 293 FTVTDYQHHDPIKYPFSV 310
92_pfamImport  265 FKVINYRFHGKISYPFNV 282
Q5R064         266 FIVSGYQCHDPIKYPFAV 283 Idiomarina loihiensis L2TR
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