Conserved Protein Domain Family
SPRY_PRY_TRIM47

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cd15808: SPRY_PRY_TRIM47 
PRY/SPRY domain in tripartite motif-containing protein 47 (TRIM47), also known as RING finger protein 100 (RNF100) or Gene overexpressed in astrocytoma protein (GOA)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM47, also known as GOA (Gene overexpressed in astrocytoma protein) or RNF100 (RING finger protein 100). TRIM47 domains are composed of RING/B-box/coiled-coil core and also known as RBCC proteins. It is highly expressed in kidney tubular cells, but lowly expressed in most tissue. It is overexpressed in astrocytoma tumor cells and plays an important role in the process of dedifferentiation that is associated with astrocytoma tumorigenesis; astrocytoma, also known as cerebral astrocytoma, is a malignant glioma that arises from astrocytes. Genome wide studies on white matter lesions have identified a novel locus on chromosome 17q25 harboring several genes such as TRIM47 and TRIM65 which pinpoints to possible novel mechanisms leading to these lesions.
Statistics
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PSSM-Id: 293980
Aligned: 5 rows
Threshold Bit Score: 399.643
Created: 6-Nov-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q96LD4       421 DYFLKFAYIVDLDSDTADKFLQLFGTKgvKRVLCPINYPLSPTRFTHCEQVLGEGALDRGTYYWEVEIIEgwVSMGVMAE 500 human
EMC89724     232 DYFLKFAFIIDLDSDTADKFIQLFGTKgaKRVLCPIPYPESPTRFINCEQVLGVNLMNRGNYYWEVELIDgwVSIGVIAE 311 rock pigeon
XP_003340356 412 DYFLKFAFIVDLDSDTADKFLQLFGTKgvKRVLCPISYPESPMRFTHCEQVLGEGILDRGTYYWEVEIIEgwVSVGVMAE 491 gray short-tail...
XP_001516333 229 DYFLKFAFIVDLDSDTADKFLQLFGTKgvKRVLCPVAYPESPTRFVHCEQVLGGGALDRGTYYWEVEIIEgwVSVGVMAE 308 platypus
EPQ18967     183 DYFLKFAYIVDLDSDTADKFLQLFGTKgvKRVLCPISYPESPTRFTHCEQVLGEGALDRGTYYWEVEIIEgwVSVGVMAE 262 Brandt's bat
Q96LD4       501 DFspqepydRGRLGRNAHSCCLQWNgrsFSVWFHGLeAPLPHpfspTVGVCLEYaDRALAFYAVRDgKMSLLRRLKASRp 580 human
EMC89724     312 DFdprasynCGRLGRNTKSCCLQWNgqnYVAWFAGSeSVIQQpffhTIGVFLEYsEKALTFYGVKDsKMTCLQQLKVSHv 391 rock pigeon
XP_003340356 492 DFsprepydRGRLGRNAHSCCLQWNgrnFSVWFYGLeASLPHsfcpTVGVCLEYaDRALAFYAVKEgKVSLLHKLRASKp 571 gray short-tail...
XP_001516333 309 DFsprepydRGRLGRNPFSCCLQWNgrnFSVWFHGLeAPLPQpfspTVGVCLEYaDRALAFYAVRDgKVQLLRRLRASRp 388 platypus
EPQ18967     263 DFspqepydRGRLGRNAHSCCLQWNgrgFSVWFHGQeAPLPHafspTVGVCLEYaDRALAFYAVRDgKVSLLRRLKATRa 342 Brandt's bat
Q96LD4       581 rrggipaSPIDPFQSRLDSHFagLFTHRLKPAFFLESVDAHLQIGP 626 human
EMC89724     392 a-----kGQCDPFQHKINHHFpyLFSCKLKPAFFLESVDAHLQIGP 432 rock pigeon
XP_003340356 572 rrggspsSPLTPFQXRLDSHFpnLFTHRLKPAFFLESVDAHLQIGP 617 gray short-tailed opossum
XP_001516333 389 rrg-pppSPLEAFQSCLDSHFggLFSRRLKPAFFLESVDAHLQIGP 433 platypus
EPQ18967     343 rrsspsaSPGDPFQSVLDSHFpgLFRSRLKPAFFLESVDAHLQIGP 388 Brandt's bat
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