Conserved Protein Domain Family
CLIP1_ZNF
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pfam16641: CLIP1_ZNF (this model, PSSM-Id:293247 is obsolete and has been replaced by 465212)
CLIP1 zinc knuckle
This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Links
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Statistics
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PSSM-Id: 293247
Aligned: 44 rows
Threshold Bit Score: 34.3464
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_010875684  794 RLFCDICDCFDlHDTEDC 811  northern pike
XP_003838917  392 lLWCEICETGG-HDILNC 408  Leptosphaeria maculans JN3
EXX71218      464 gLYCEICEQEG-HDIISC 480  Rhizophagus irregularis DAOM 197198w
EIE79626      903 gPYCEICEIYG-HDLISC 919  Rhizopus delemar RA 99-880
EPB88923     1079 aAYCELCEVNG-HDLISC 1095 Mucor circinelloides f. circinelloides 1006PhL
XP_011113132  724 aAYCDLCEKHG-HDILSC 740  Dactylellina haptotyla CBS 200.50
EER39028      635 sKWCALCERDG-HESIDC 651  Ajellomyces capsulatus H143
XP_007777377  760 NKWCALCERDG-HDATNC 776  Coniosporium apollinis CBS 100218
XP_007359588  383 aLWCDDCESHG-HVAADC 399  Auricularia delicata TFB-10046 SS5
XP_002401880 1014 RPYCNVCEVFG-HTSAEC 1030 black-legged tick
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