3E7K


Conserved Protein Domain Family
TRPM_tetra

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pfam16519: TRPM_tetra (this model, PSSM-Id:293127 is obsolete and has been replaced by 465156)
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Tetramerization domain of TRPM
TRPM7_tetra is a short anti-parallel coiled-coil tetramerization domain of the transient receptor potential cation channel subfamily M member proteins 1-8. It is held together by extensive core packing and interstrand polar interactions. Transient receptor potential (TRP) channels comprise a large family of tetrameric cation-selective ion channels that respond to diverse forms of sensory input. The presence of cytoplasmic domains that direct channel assembly appears to be a feature of many voltage-gated ion channel superfamily members.
Statistics
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PSSM-Id: 293127
Aligned: 21 rows
Threshold Bit Score: 79.2506
Created: 21-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3E7K_A          5 RVTFERVEQMSIQIKEVGDRVNYIKRSLQSLDSQIGHLQDLSALTVDTLKTL 56   Norway rat
EKC26700     1279 RVINERVENMTMRMDDINQKENSIKLSLQTMDYRMSKLEDVALQTNDTLSVL 1330 Pacific oyster
ELW63124      174 RVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERL 225  Chinese tree shrew
XP_011269034 1200 KVTTDRVENMYQKIEDIDKKESTQNASLQTVEFRIRKLEELSQQTVAHLGVI 1251 Florida carpenter ant
XP_002602021  619 RMTQDRVEHMSMRVDEVHEKEGAVKVSLTSLDQRLARLENVSAVTTTTLQRL 670  Florida lancelet
CDQ79847      259 RLTSDRVETMCIQLKEVGNRVNFIKRSLHTLDSQIGHLQDLSALTVDTLKTL 310  rainbow trout
XP_003967605 1230 KVTSERVENMFMRLEEVNERENTMKASLQTVDLRLAQLEEIHGRMAVALEKL 1281 torafugu
XP_003245193 1176 KMSLEKTENIQQKVDDINQKENLQNSSVQALEFRLHKIEDLMDQTLSTLGVi 1227 pea aphid
XP_002423257 1100 KTTTEKVENMYQKVEDINQKENAQTTSIQSVEFRLRKVEDVAEQILNHLDvv 1151 human body louse
XP_012551961 1197 RNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRLRKLEDIAEQTMSHLAVi 1248 domestic silkworm
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